RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 TOP3AQ13472 1001 aaPredicted RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 PGGHGQ32M88 737 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 GXYLT1Q4G148 440 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 C1QL3Q5VWW1 255 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SLC27A4Q6P1M0 643 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 CASP12Q6UXS9 341 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 PTCHD4Q6ZW05 846 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 GRINAQ7Z429 371 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 DND1Q8IYX4 353 aaKnown RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TCEANCQ8N8B7 351 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 OR51A7Q8NH64 312 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 POC1BQ8TC44 478 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 OSTF1Q92882 214 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 DNAJA3Q96EY1 480 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 IP6K3Q96PC2 410 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 MOGAT1Q96PD6 335 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TNFRSF13CQ96RJ3 184 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 SCNM1Q9BWG6 230 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 POLDIP3Q9BY77 421 aaKnown RBP6.31□□□□□ -1.4
PTCD2-201ENST00000308077 UBQLN3Q9H347 655 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 HHATLQ9HCP6 504 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 MED17Q9NVC6 651 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 KLK13Q9UKR3 277 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 VDAC3Q9Y277 283 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 TMED7Q9Y3B3 224 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 NCKAP5O14513 1909 aa6.31□□□□□ -1.4
PTCD2-201ENST00000308077 A0A087WXM4 84 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 A0A0G2JMM0 328 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 A0A1W2PPB8 328 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 A0A1W2PRS3 328 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 KIR3DP1A8MWS1 328 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 NKX2-8O15522 239 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SUSD5O60279 629 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 HCN1O60741 890 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 NPIPB7O75200 414 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ENTPD6O75354 484 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SLC2A10O95528 541 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 CLPTM1O96005 669 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 F10P00742 488 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 IGF2P01344 180 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 BGLAPP02818 100 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 CXCR1P25024 350 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ITGA3P26006 1051 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 MSX1P28360 303 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 PCYT1AP49585 367 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SLC35A2P78381 396 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TEKQ02763 1124 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 AIMP2Q13155 320 aaKnown RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 CLN3Q13286 438 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF74Q16587 644 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 PLPPR5Q32ZL2 321 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ZBED5Q49AG3 693 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 NADK2Q4G0N4 442 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TMEM201Q5SNT2 666 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SLC22A10Q63ZE4 541 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 JMJD6Q6NYC1 403 aaPredicted RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SMARCD3Q6STE5 483 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 RTL4Q6ZR62 310 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 OAFQ86UD1 273 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 CYP4Z2PQ8N1L4 340 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 LIPHQ8WWY8 451 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ST8SIA1Q92185 356 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TAAR8Q969N4 342 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 PTDSS2Q9BVG9 487 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 OR11A1Q9GZK7 315 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 LHPPQ9H008 270 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 AMBNQ9NP70 447 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SDHAF3Q9NRP4 125 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 DNAJC27Q9NZQ0 273 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 GPR52Q9Y2T5 361 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 FN1P02751 2386 aaKnown RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TRABD2BA6NFA1 517 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ARGFXA6NJG6 315 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 PTGES3LE9PB15 166 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SNPHO15079 494 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SURF4O15260 269 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TLX2O43763 284 aaPredicted RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 EFNA2O43921 213 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 MPZL2O60487 215 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 FAM20BO75063 409 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 RCBTB2O95199 551 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ADRA2AP08913 450 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ASAH2BP0C7U1 165 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 IL11P20809 199 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TCEA1P23193 301 aaKnown RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 EEF1B2P24534 225 aaKnown RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 HTR3AP46098 478 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 RPS5P46782 204 aaKnown RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SLC9A3P48764 834 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 RPS4XP62701 263 aaKnown RBP6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TUBA4AP68366 448 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SNAPC1Q16533 368 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 TBC1D25Q3MII6 688 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 SLC25A53Q5H9E4 307 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 ZNF773Q6PK81 442 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 PLCZ1Q86YW0 608 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 FAM26EQ8N5C1 309 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 OR2T33Q8NG76 320 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 OR4K17Q8NGC6 315 aa6.3□□□□□ -1.4
PTCD2-201ENST00000308077 OR8J1Q8NGP2 316 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms