RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SIAH1Q8IUQ4 282 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 OR5L1Q8NGL2 311 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 BRIX1Q8TDN6 353 aaKnown RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 C14orf79Q96F83 325 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 SELENOIQ9C0D9 397 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 RGPD2P0DJD1 1756 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 MED19A0JLT2 244 aaPredicted RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 OR10J4P0C629 311 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 CTSCP53634 463 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 SIRPAP78324 504 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 OR52E8Q6IFG1 317 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 TMEM182Q6ZP80 229 aaPredicted RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 ANKRD60Q9BZ19 345 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 CGGBP1Q9UFW8 167 aaPredicted RBP11.8□□□□□ -0.52
USP38-201ENST00000307017 CDHR4A6H8M9 788 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 MROH6A6NGR9 719 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 ARHGAP33O14559 1287 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 HBA1P69905 142 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 EMC9Q9Y3B6 208 aa11.8□□□□□ -0.52
USP38-201ENST00000307017 TOX4O94842 621 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 EDN1P05305 212 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 HOXD11P31277 338 aaPredicted RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 ZNF33BQ06732 778 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 C9orf152Q5JTZ5 239 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 GDPD1Q8N9F7 314 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 LKAAEAR1Q8TD35 194 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 KIAA1143Q96AT1 154 aaPredicted RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 RASD2Q96D21 266 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 SLC17A9Q9BYT1 436 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 STRADBQ9C0K7 418 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 OR52D1Q9H346 318 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 DZANK1Q9NVP4 752 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 CAMTA1Q9Y6Y1 1673 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 TMEM131LA2VDJ0 1609 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 GRPP07492 148 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 MPC1LP0DKB6 136 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 SPINK2P20155 84 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 HAGHQ16775 308 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 ZNF322Q6U7Q0 402 aaPredicted RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 FAM109AQ8N4B1 249 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 ELP4Q96EB1 424 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 PKMYT1Q99640 499 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 IL26Q9NPH9 171 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 FBXO8Q9NRD0 319 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 ADGRB1O14514 1584 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 FMN2Q9NZ56 1722 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 TMEM269A0A1B0GVZ9 245 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 FAM221AA4D161 298 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 OR5H15A6NDH6 313 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 OR5H14A6NHG9 310 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 OR5H1A6NKK0 313 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 ANKRD30BLA7E2S9 258 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 NFYBP25208 207 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 APEX1P27695 318 aaKnown RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 CLDN17P56750 224 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 RPL23AP62750 156 aaKnown RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 ADGRG5Q8IZF4 528 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 RHEBL1Q8TAI7 183 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 ACOT11Q8WXI4 607 aaPredicted RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 CXCL16Q9H2A7 254 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 MEPEQ9NQ76 525 aaPredicted RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 TM7SF3Q9NS93 570 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 SIDT1Q9NXL6 827 aaKnown RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 FAM53CQ9NYF3 392 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 TRAPPC2LQ9UL33 140 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 GPR37L1O60883 481 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 SOCS5O75159 536 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 CLDN1O95832 211 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 GPR176Q14439 515 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 TMEM88Q6PEY1 159 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 DPPA4Q7L190 304 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 LILRB4Q8NHJ6 448 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 L3HYPDHQ96EM0 354 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 ZNF75AQ96N20 296 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 DCAF13Q9NV06 445 aaKnown RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 ARL2-SNX15V9GYD0 113 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 ZCWPW2A0A1B0GU75 182 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 POU3F2P20265 443 aaPredicted RBP11.79□□□□□ -0.52
USP38-201ENST00000307017 EMP2P54851 167 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 RAB15P59190 212 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 GPR18Q14330 331 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 MARCH8Q5T0T0 291 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 ACOT4Q8N9L9 421 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 UBAC2Q8NBM4 344 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 SCCPDHQ8NBX0 429 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 STT3BQ8TCJ2 826 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 SLC2A13Q96QE2 648 aa11.79□□□□□ -0.52
USP38-201ENST00000307017 IGHV3-20A0A0C4DH32 117 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 CYTIPO60759 359 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 OR7C1O76099 320 aaPredicted RBP11.78□□□□□ -0.52
USP38-201ENST00000307017 RCAN2Q14206 197 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 PEA15Q15121 130 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 FCN2Q15485 313 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NATD1Q8N6N6 113 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 ZNF454Q8N9F8 522 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 OR1J4Q8NGS1 313 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 ORAI1Q96D31 301 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 OR11A1Q9GZK7 315 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 PLK3Q9H4B4 646 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms