RNA–Protein interactions for RNA: ENST00000306549.5

PCDHB1-201, Transcript of protocadherin beta 1, humanhuman

APPRIS P1 BASIC

Gene PCDHB1, Length 8,210 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1-201ENST00000306549 H0YAE9 185 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 ADAP00813 363 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 CPOXP36551 454 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 UBE2G2P60604 165 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC22A10Q63ZE4 541 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 NANOGP8Q6NSW7 305 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 BRICD5Q6PL45 260 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 RNF113BQ8IZP6 322 aaKnown RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 RBMXL3Q8N7X1 1067 aaKnown RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 OR13J1Q8NGT2 312 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 BSCL2Q96G97 398 aaPredicted RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SDR39U1Q9NRG7 319 aaPredicted RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC22A7Q9Y694 548 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 HMX3A6NHT5 357 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 E9PI62 339 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 PRRG2O14669 202 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 FANCGO15287 622 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 DEFA4P12838 97 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 ACVR1BP36896 505 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SIM1P81133 766 aaPredicted RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 PAN3Q58A45 887 aaKnown RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 AGAP6Q5VW22 663 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 OR8J1Q8NGP2 316 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC37A2Q8TED4 501 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SHISA7A6NL88 538 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 INMT-MINDY4F8WBC2 141 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 TNFSF14O43557 240 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 RFPL3O75679 317 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 PYCR3Q53H96 274 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF767PQ75MW2 155 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 NICN1Q9BSH3 213 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 B3GAT1Q9P2W7 334 aa7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 SPTAN1Q13813 2472 aaKnown RBP7.77□□□□□ -1.17
PCDHB1-201ENST00000306549 M0QZ24 198 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 CTNSO60931 367 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 MAS1P04201 325 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 CHRM4P08173 479 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 GSTP1P09211 210 aaKnown RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 BMP1P13497 986 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 RAB11AP62491 216 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC35A1P78382 337 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 SF3A2Q15428 464 aaKnown RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ZMAT1Q5H9K5 638 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF529Q6P280 563 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 FITM2Q8N6M3 262 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 STEAP2Q8NFT2 490 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 FOXRED1Q96CU9 486 aaPredicted RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 PIGQQ9BRB3 760 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF286AQ9HBT8 521 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 SMCO4Q9NRQ5 59 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 GPATCH2Q9NW75 528 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 TRBV11-1A0A0K0K1C0 115 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 F6UZH7 168 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC43A1O75387 559 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC35E2P0CK97 266 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ETV5P41161 510 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 AQP4P55087 323 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 WDR4P57081 412 aaKnown RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 DCST2Q5T1A1 773 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 IL17RDQ8NFM7 739 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 SGK3Q96BR1 496 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 BIRC7Q96CA5 298 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 OR4K3Q96R72 315 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF587Q96SQ5 575 aaPredicted RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 SIDT1Q9NXL6 827 aaKnown RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 MUC6Q6W4X9 2439 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 SLC35F4A4IF30 521 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 C12orf71A8MTZ7 269 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 EEF1E1-BLOC1S5C9J1V9 151 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 EEF1E1O43324 174 aaKnown RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 RGS11O94810 467 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 TP53P04637 393 aaPredicted RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ADH4P08319 380 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 KDELR2P33947 212 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 REEP5Q00765 189 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 LINC01599Q8WXQ3 324 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 FIGNL2A6NMB9 653 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 OR52A4PA6NMU1 304 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 MRPS14O60783 128 aaKnown RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 NSA2O95478 260 aaKnown RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 CRYBA1P05813 215 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 FGF3P11487 239 aaPredicted RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 OR4D1Q15615 310 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF321PQ8N8H1 164 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 FAM83FQ8NEG4 500 aaPredicted RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 SIP14410 1827 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ZNF407Q9C0G0 2248 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 GMDSO60547 372 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 GLCEO94923 617 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 NDUFB2O95178 105 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 TK1P04183 234 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 PXNP49023 591 aaPredicted RBP7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 MLLT10P55197 1068 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 RAC1P63000 192 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 OR6T1Q8NGN1 323 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 NANPQ8TBE9 248 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ZFAND1Q8TCF1 268 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 OIT3Q8WWZ8 545 aa7.76□□□□□ -1.17
PCDHB1-201ENST00000306549 ARRDC3Q96B67 414 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms