RNA–Protein interactions for RNA: ENST00000306320.9

RETREG1-201, Transcript of reticulophagy regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG1, Length 3,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG1-201ENST00000306320 PTP4A3O75365 173 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 RASGRP1O95267 797 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 MPIP34949 423 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 CDK3Q00526 305 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 SCRN3Q0VDG4 424 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 FAM209BQ5JX69 171 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 RAB12Q6IQ22 244 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 SEZ6L2Q6UXD5 910 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 FAM98AQ8NCA5 519 aaKnown RBP16.54■□□□□ 0.24
RETREG1-201ENST00000306320 PXT1Q8NFP0 134 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 OR13C2Q8NGS9 318 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 ACTR6Q9GZN1 396 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 OR52A5Q9H2C5 316 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 SIRT3Q9NTG7 399 aaPredicted RBP16.54■□□□□ 0.24
RETREG1-201ENST00000306320 FARS2O95363 451 aaKnown RBP16.54■□□□□ 0.24
RETREG1-201ENST00000306320 PTBP1P26599 531 aaKnown RBP eCLIP16.54■□□□□ 0.24
RETREG1-201ENST00000306320 NTSP30990 170 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 MC3RP41968 323 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 GPM6BQ13491 265 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 LTB4RQ15722 352 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 C9orf50Q5SZB4 431 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 UNQ6126/PRO20091Q6UXV3 157 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 FRRS1Q6ZNA5 592 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 OR2L2Q8NH16 312 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 OR52N1Q8NH53 320 aa16.54■□□□□ 0.24
RETREG1-201ENST00000306320 INSM2Q96T92 566 aaPredicted RBP16.54■□□□□ 0.24
RETREG1-201ENST00000306320 EDDM13A0A1B0GTR0 161 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 PLSCR5A0PG75 271 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 ZNF705EA8MWA4 302 aaPredicted RBP16.53■□□□□ 0.24
RETREG1-201ENST00000306320 RAD1O60671 282 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 PPP1R3DO95685 299 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 EPXP11678 715 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 AK4P27144 223 aaPredicted RBP16.53■□□□□ 0.24
RETREG1-201ENST00000306320 GMFBP60983 142 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 TFF2Q03403 129 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 PDE7AQ13946 482 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 CRMP1Q14194 572 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 PCGF3Q3KNV8 242 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 KIAA1211LQ6NV74 962 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 SYNPRQ8TBG9 265 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 STK35Q8TDR2 534 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 SLC41A3Q96GZ6 507 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 PEX11GQ96HA9 241 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 SGPP1Q9BX95 441 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 PIPOXQ9P0Z9 390 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 DENND4CQ5VZ89 1909 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 PRSS44E7EML9 344 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 TMIGD3P0DMS9 266 aaPredicted RBP16.53■□□□□ 0.24
RETREG1-201ENST00000306320 PPP3CBP16298 524 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 TEAD1P28347 426 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 UBE2IP63279 158 aaKnown RBP16.53■□□□□ 0.24
RETREG1-201ENST00000306320 RBMS2Q15434 407 aaKnown RBP16.53■□□□□ 0.24
RETREG1-201ENST00000306320 ZNF230Q9UIE0 474 aaPredicted RBP16.53■□□□□ 0.24
RETREG1-201ENST00000306320 A0A087WV48 116 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 ZNF860A6NHJ4 632 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 LINC00587B1AMM8 73 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 ERI3O43414 337 aaKnown RBP16.53■□□□□ 0.24
RETREG1-201ENST00000306320 KAT7O95251 611 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 MAS1P04201 325 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 GABRA1P14867 456 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 STAT5AP42229 794 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 AKR1C3P42330 323 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 H2BFSP57053 126 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 RPS15P62841 145 aaKnown RBP16.53■□□□□ 0.24
RETREG1-201ENST00000306320 KLF9Q13886 244 aaPredicted RBP16.53■□□□□ 0.24
RETREG1-201ENST00000306320 OR7E24Q6IFN5 339 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 ZNF485Q8NCK3 441 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 SDR9C7Q8NEX9 313 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 OR4E2Q8NGC2 313 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 OR4K13Q8NH42 304 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 TREM1Q9NP99 234 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 NOX4Q9NPH5 578 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 C20orf141Q9NUB4 165 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 SPHK1Q9NYA1 384 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 KLHL9Q9P2J3 617 aa16.53■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3DA0A087WVF3 549 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3IA0A087WXS9 549 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3EA0A087X179 549 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3KA0A087X1G2 549 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3FA6NER0 549 aaPredicted RBP16.52■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3LB9A6J9 549 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 F5H5P2 479 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 SERPINA3P01011 423 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3HP0C7X1 549 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 MMP15P51511 669 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 PRR5P85299 388 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 FLI1Q01543 452 aaPredicted RBP16.52■□□□□ 0.24
RETREG1-201ENST00000306320 PRRT3Q5FWE3 981 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 KHDRBS2Q5VWX1 349 aaKnown RBP16.52■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3GQ6DHY5 549 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3CQ6IPX1 549 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 TBC1D3Q8IZP1 549 aaPredicted RBP16.52■□□□□ 0.24
RETREG1-201ENST00000306320 CCL4L1Q8NHW4 92 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 HAVCR2Q8TDQ0 301 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 PELOQ9BRX2 385 aaKnown RBP16.52■□□□□ 0.24
RETREG1-201ENST00000306320 DPP7Q9UHL4 492 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 STON1Q9Y6Q2 735 aa16.52■□□□□ 0.24
RETREG1-201ENST00000306320 SNRNP200O75643 2136 aaKnown RBP16.52■□□□□ 0.24
RETREG1-201ENST00000306320 KIAA0355O15063 1070 aa16.52■□□□□ 0.23
RETREG1-201ENST00000306320 LINC01565O15544 149 aa16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms