RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 DPP10Q8N608 796 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 C3orf49Q96BT1 292 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 ZNF607Q96SK3 696 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 PIP5K1AQ99755 562 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 TAPBPLQ9BX59 468 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 SLC9A8Q9Y2E8 581 aa23.39■■□□□ 1.33
CDKN2A-201ENST00000304494 PRORSD1PA6NEY8 169 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 LIPT2A6NK58 231 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 LYZL6O75951 148 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 EDNRAP25101 427 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 OR7A5Q15622 319 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 TAB1Q15750 504 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 OTUD3Q5T2D3 398 aaPredicted RBP23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 DHRS4L2Q6PKH6 230 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 ZNF704Q6ZNC4 412 aaPredicted RBP23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 ATG4DQ86TL0 474 aaPredicted RBP23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 BHLHE22Q8NFJ8 381 aaPredicted RBP23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 CCL19Q99731 98 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 TMEM120AQ9BXJ8 343 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 PARPBPQ9NWS1 579 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 ZNF446Q9NWS9 450 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 RPS6KB2Q9UBS0 482 aa23.38■■□□□ 1.33
CDKN2A-201ENST00000304494 FRS3O43559 492 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 RAMP1O60894 148 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 SERPINB7O75635 380 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 CD99P14209 185 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 IGHV1-2P23083 117 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 BNIP2Q12982 314 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 CAPRIN1Q14444 709 aaKnown RBP23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 SLC17A1Q14916 467 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 HIPK4Q8NE63 616 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 STK35Q8TDR2 534 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 ANKRD27Q96NW4 1050 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 TMEM204Q9BSN7 226 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 ESRP2Q9H6T0 727 aaKnown RBP23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 ANGPT4Q9Y264 503 aa23.37■■□□□ 1.33
CDKN2A-201ENST00000304494 TMEM229AB2RXF0 380 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 GGT1P19440 569 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 ADSLP30566 484 aaPredicted RBP23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 HOXC5Q00444 222 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 NFYCQ13952 458 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 STK11Q15831 433 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 ADRM1Q16186 407 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 C1orf140Q5VVS0 124 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 P2RY8Q86VZ1 359 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 MUCL1Q96DR8 90 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 CGREF1Q99674 301 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 TMUB1Q9BVT8 246 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 SF3B5Q9BWJ5 86 aaKnown RBP23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 ASB6Q9NWX5 421 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 FLVCR1Q9Y5Y0 555 aa23.36■■□□□ 1.33
CDKN2A-201ENST00000304494 AQP7P3A6NL99 342 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 AKR7A3O95154 331 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 IGHV3-9P01782 118 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 ADAM8P78325 824 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 CYP51A1Q16850 503 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 HSP90B2PQ58FF3 399 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 TIMM23BQ5SRD1 257 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 CASP12Q6UXS9 341 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 RETREG3Q86VR2 466 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 TMEM99Q8N816 258 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 LSMEM1Q8N8F7 131 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 C11orf65Q8NCR3 313 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 PIF1Q9H611 641 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 EVA1AQ9H8M9 152 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 C12orf10Q9HB07 376 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 MALT1Q9UDY8 824 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 SLC13A4Q9UKG4 626 aa23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 TEP1Q99973 2627 aaKnown RBP23.35■■□□□ 1.33
CDKN2A-201ENST00000304494 ELOA3DA6NLF2 546 aaPredicted RBP23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 SMPD2O60906 423 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 NPIPB7O75200 414 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 AHSA1O95433 338 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 NTF4P34130 210 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 RBBP4Q09028 425 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 PPA1Q15181 289 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 ELOA3BQ3SY89 546 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 C6orf89Q6UWU4 347 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 ARMC8Q8IUR7 673 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 LRRC75A-AS1Q8N1F1 130 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 ZNF433Q8N7K0 673 aaPredicted RBP23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 ELOA3Q8NG57 546 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 FGFR1OP2Q9NVK5 253 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 ADPRHL2Q9NX46 363 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 TAS2R16Q9NYV7 291 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 TESQ9UGI8 421 aaKnown RBP23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 VPS13CQ709C8 3753 aa23.34■■□□□ 1.33
CDKN2A-201ENST00000304494 ITPR3Q14573 2671 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 CIB4A0PJX0 185 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 VAMP5O95183 116 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 CD3EP07766 207 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 AQP1P29972 269 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 HOXC12P31275 282 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 ARFIP2P53365 341 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 MTPNP58546 118 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 NCALDP61601 193 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 NKX6-1P78426 367 aaPredicted RBP23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 NCMAPQ5T1S8 102 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 TMEM225Q6GV28 225 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 C5orf46Q6UWT4 87 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms