RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 LOC110117498-PIK3R3F6TDL0 507 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 HCRTR2O43614 444 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 CDRT1O95170 752 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 SNX4O95219 450 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 MT-ND5P03915 603 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 HIST1H1CP16403 213 aaKnown RBP17.71■□□□□ 0.43
HOXC4-201ENST00000303406 TACR3P29371 465 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 RPL4P36578 427 aaKnown RBP17.71■□□□□ 0.43
HOXC4-201ENST00000303406 P2RX1P51575 399 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 EMP2P54851 167 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 EGR4Q05215 589 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 OXA1LQ15070 435 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 TRAM1Q15629 374 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 TBC1D25Q3MII6 688 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 TMEM205Q6UW68 189 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 APCDD1LQ8NCL9 501 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 TIMP4Q99727 224 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 NMNAT2Q9BZQ4 307 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 FKRPQ9H9S5 495 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 TRIM36Q9NQ86 728 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 NANSQ9NR45 359 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 PCDHGB7Q9Y5F8 929 aa17.71■□□□□ 0.43
HOXC4-201ENST00000303406 PRUNE2Q8WUY3 3088 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 TRIOO75962 3097 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 CDC14CA4D256 554 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 SLC35F4A4IF30 521 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 UPK1BO75841 260 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 CD14P08571 375 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 UQCRC1P31930 480 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 EVI2BP34910 448 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 SLC26A5P58743 744 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 FABP5Q01469 135 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 EMC4Q5J8M3 183 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 FCRLBQ6BAA4 426 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 C22orf42Q6IC83 251 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 MARCH3Q86UD3 253 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 KLBQ86Z14 1044 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 NPEPL1Q8NDH3 523 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 OR10H4Q8NGA5 316 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 OR4K13Q8NH42 304 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 SMPDL3BQ92485 455 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 BARHL1Q9BZE3 327 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 RTN4RQ9BZR6 473 aa17.7■□□□□ 0.42
HOXC4-201ENST00000303406 C19orf25Q9UFG5 118 aaPredicted RBP17.7■□□□□ 0.42
HOXC4-201ENST00000303406 ZC3H12DA2A288 527 aaKnown RBP17.69■□□□□ 0.42
HOXC4-201ENST00000303406 LRRN3E7EW58 273 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 OR2T7P0C7T2 308 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 OCM2P0CE71 109 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 OCMP0CE72 109 aaPredicted RBP17.69■□□□□ 0.42
HOXC4-201ENST00000303406 GP1BBP13224 206 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 SLC25A1P53007 311 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 ZNF85Q03923 595 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 SPANXN2Q5MJ10 180 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 C5orf46Q6UWT4 87 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 CYB561A3Q8NBI2 242 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 SDR9C7Q8NEX9 313 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 OR5L2Q8NGL0 311 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 OR2T27Q8NH04 317 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 RNF138Q8WVD3 245 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 SPSB2Q99619 263 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 SYNDIG1Q9H7V2 258 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 SNTG1Q9NSN8 517 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 TOR4AQ9NXH8 423 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 NXT1Q9UKK6 140 aaKnown RBP17.69■□□□□ 0.42
HOXC4-201ENST00000303406 YARS2Q9Y2Z4 477 aaKnown RBP17.69■□□□□ 0.42
HOXC4-201ENST00000303406 NPFFR2Q9Y5X5 522 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 DNAH14Q0VDD8 3507 aa17.69■□□□□ 0.42
HOXC4-201ENST00000303406 TRAV36DV7A0A075B6V5 113 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 D6RAR5 112 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 ADAM10O14672 748 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 RNF13O43567 381 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 CPNE3O75131 537 aaKnown RBP17.68■□□□□ 0.42
HOXC4-201ENST00000303406 CELP19835 753 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 CXCR1P25024 350 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 DIO1P49895 249 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 SLC16A1P53985 500 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 SUMO3P55854 103 aaPredicted RBP17.68■□□□□ 0.42
HOXC4-201ENST00000303406 DLX5P56178 289 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 IFITM3Q01628 133 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 TRIM61Q5EBN2 209 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 VASNQ6EMK4 673 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 FAAH2Q6GMR7 532 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 DESI1Q6ICB0 168 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 MRPL14Q6P1L8 145 aaKnown RBP17.68■□□□□ 0.42
HOXC4-201ENST00000303406 PAPD4Q6PIY7 484 aaKnown RBP17.68■□□□□ 0.42
HOXC4-201ENST00000303406 FAM122BQ7Z309 247 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 SYS1Q8N2H4 156 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 PARP16Q8N5Y8 322 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 AP3S1Q92572 193 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 TMEM203Q969S6 136 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 MRPL48Q96GC5 212 aaKnown RBP17.68■□□□□ 0.42
HOXC4-201ENST00000303406 CNN2Q99439 309 aaKnown RBP17.68■□□□□ 0.42
HOXC4-201ENST00000303406 LPAR4Q99677 370 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 WDR77Q9BQA1 342 aaPredicted RBP17.68■□□□□ 0.42
HOXC4-201ENST00000303406 WDR54Q9H977 334 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 TRAPPC4Q9Y296 219 aa17.68■□□□□ 0.42
HOXC4-201ENST00000303406 MT-ATP6P00846 226 aa17.67■□□□□ 0.42
HOXC4-201ENST00000303406 CLUP10909 449 aa17.67■□□□□ 0.42
HOXC4-201ENST00000303406 HTR3AP46098 478 aa17.67■□□□□ 0.42
HOXC4-201ENST00000303406 POLR2HP52434 150 aaKnown RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms