RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 WNT4P56705 351 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 ISXQ2M1V0 245 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 NIPAL3Q6P499 406 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 B3GLCTQ6Y288 498 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 DPY19L2P2Q6ZN68 376 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 TTC9Q92623 222 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 KLHL21Q9UJP4 597 aa13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 SPIN1Q9Y657 262 aaPredicted RBP13.22□□□□□ -0.29
SHCBP1-201ENST00000303383 PNMA8CA0A1B0GUJ8 204 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 PSMA1P25786 263 aaKnown RBP13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 OTX2P32243 289 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 SOX3P41225 446 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 ZNF74Q16587 644 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 GHDCQ8N2G8 530 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 RELTQ969Z4 430 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 OR51E2Q9H255 320 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 GALNT9Q9HCQ5 603 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 MRPS18AQ9NVS2 196 aaKnown RBP13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 IGKV1D-42A0A075B6H8 117 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 TMED7-TICAM2A0A0A6YYA0 188 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 TP53I11O14683 189 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 NADKO95544 446 aaPredicted RBP13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 IGHEP01854 428 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 ERVK-25P63136 954 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 INSM1Q01101 510 aaPredicted RBP13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 LGALS3BPQ08380 585 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 PCOLCEQ15113 449 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 GRINAQ7Z429 371 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 JAZF1Q86VZ6 243 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 KLHL36Q8N4N3 616 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 KBTBD8Q8NFY9 601 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 GATAD2BQ8WXI9 593 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 FGF11Q92914 225 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 TBX5Q99593 518 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 KATNB1Q9BVA0 655 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 DCSTAMPQ9H295 470 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 MMP25Q9NPA2 562 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 NCDNQ9UBB6 729 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 TMED7Q9Y3B3 224 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 ADAM18Q9Y3Q7 739 aa13.21□□□□□ -0.29
SHCBP1-201ENST00000303383 SUSD5O60279 629 aa13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 SCG5P05408 212 aa13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 AQP2P41181 271 aa13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 RPS3AP61247 264 aaKnown RBP13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 ALG10Q5BKT4 473 aa13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 OR2G6Q5TZ20 316 aa13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 RNLSQ5VYX0 342 aa13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 OR10H4Q8NGA5 316 aa13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 KTI12Q96EK9 354 aaPredicted RBP13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 ADAM19Q9H013 955 aa13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 RERGLQ9H628 205 aa13.21□□□□□ -0.3
SHCBP1-201ENST00000303383 IGHV1-45A0A0A0MS14 117 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 FAM47E-STBD1D6RA91 191 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 FOXD2O60548 495 aaPredicted RBP13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF354AO60765 605 aaPredicted RBP13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 OR6A2O95222 327 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 GYPBP06028 91 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 UMODP07911 640 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 MST1P26927 711 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 CTXN1P60606 82 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 LIPKQ5VXJ0 399 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 GPR119Q8TDV5 335 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 KLHDC3Q9BQ90 382 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 WDR70Q9NW82 654 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 MED11Q9P086 117 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 VDAC3Q9Y277 283 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 TRAV36DV7A0A075B6V5 113 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 DAPL1A0PJW8 107 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 ZC3H12DA2A288 527 aaKnown RBP13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 PLD2O14939 933 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 KLF7O75840 302 aaPredicted RBP13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 CLPXO76031 633 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 AHSA1O95433 338 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 MRPL3P09001 348 aaKnown RBP13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 HIST1H1CP16403 213 aaKnown RBP13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 HTR3AP46098 478 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF41P51814 821 aaPredicted RBP13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 MLLT11Q13015 90 aaPredicted RBP13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 ARMC4Q5T2S8 1044 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 DHRS13Q6UX07 377 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 TMPRSS11AQ6ZMR5 421 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 USP43Q70EL4 1123 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 ACBD7Q8N6N7 88 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 MOGAT1Q96PD6 335 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 OPALINQ96PE5 141 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 TOR4AQ9NXH8 423 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 HS3ST3B1Q9Y662 390 aa13.2□□□□□ -0.3
SHCBP1-201ENST00000303383 LOC102723996A0A087X1L8 192 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 TMEM129A0AVI4 362 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 ITGA10O75578 1167 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 MT-CO3P00414 261 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 GTF2E2P29084 291 aaKnown RBP13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 TMEM156Q8N614 296 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 ATP6V1C2Q8NEY4 427 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 OR10G3Q8NGC4 313 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 MOSPD2Q8NHP6 518 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 SPACA9Q96E40 222 aaPredicted RBP13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 RASL10BQ96S79 203 aa13.19□□□□□ -0.3
SHCBP1-201ENST00000303383 ZNF160Q9HCG1 818 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms