RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ANKRD61A6NGH8 418 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 INMT-MINDY4F8WBC2 141 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 H0YAE9 185 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 IGFBP1P08833 259 aaPredicted RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SRP14P37108 136 aaKnown RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 KCNJ10P78508 379 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 CNN3Q15417 329 aaKnown RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ATP6AP1Q15904 470 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 C3AR1Q16581 482 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF684Q5T5D7 378 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 AGAP7PQ5VUJ5 663 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ZC3H3Q8IXZ2 948 aaKnown RBP7.24□□□□□ -1.25
SCN9A-201ENST00000303354 OR6V1Q8N148 313 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 AGAP4Q96P64 663 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 KATNB1Q9BVA0 655 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 MTMR10Q9NXD2 777 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 ETAA1Q9NY74 926 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 TAS2R3Q9NYW6 316 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 VAPAQ9P0L0 249 aa7.24□□□□□ -1.25
SCN9A-201ENST00000303354 SLC19A2O60779 497 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 OSMP13725 252 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 IMPA1P29218 277 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 IDH3GP51553 393 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 YPEL5P62699 121 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SNTB2Q13425 540 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 AADACL3Q5VUY0 350 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 HDAC2Q92769 488 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SGPP1Q9BX95 441 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 RGCCQ9H4X1 137 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 GNG12Q9UBI6 72 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 CRYBA1P05813 215 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 GLI4P10075 376 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 FBXO27Q8NI29 283 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 TFAP2CQ92754 450 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 CMSS1Q9BQ75 279 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF225Q9UK10 706 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 WDR37Q9Y2I8 494 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 B8ZZF3 427 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 OR7A17O14581 309 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ZNHIT1O43257 154 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 HCRTR1O43613 425 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SOX15O60248 233 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ACTC1P68032 377 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ACTA1P68133 377 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SHEQ5VZ18 495 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 OR5D14Q8NGL3 314 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 CHPT1Q8WUD6 406 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 PINX1Q96BK5 328 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 C7orf50Q9BRJ6 194 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 OR51E2Q9H255 320 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 GPR160Q9UJ42 338 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ATG4BQ9Y4P1 393 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM72A0PK05 275 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 HPGDSO60760 199 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SPDEFO95238 335 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 RPL19P84098 196 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 OR2G6Q5TZ20 316 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF367Q7RTV3 350 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 OR13J1Q8NGT2 312 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 LPAR2Q9HBW0 351 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 THSD1Q9NS62 852 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 TRBV4-1A0A0J9YWV2 114 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 A6NIZ1 184 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 HYAL3O43820 417 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SRFP11831 508 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 RAP1BP61224 184 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 RAP1AP62834 184 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SLC10A1Q14973 349 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ALKAL1Q6UXT8 129 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 RBM12BQ8IXT5 1001 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 CHTF18Q8WVB6 975 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 UTP4Q969X6 686 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 PDCD1LG2Q9BQ51 273 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SIDT1Q9NXL6 827 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 OR6C2Q9NZP2 312 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 MMP17Q9ULZ9 603 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SPAARA0A1B0GVQ0 90 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 A0A1W2PRV1 198 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 FAM221AA4D161 298 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 KLHL33A6NCF5 533 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 PATE3B3GLJ2 98 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 HOXB6P17509 224 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 HNF1AP20823 631 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 TACR1P25103 407 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 CSNK1DP48730 415 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 PDCD1Q15116 288 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ACSM3Q53FZ2 586 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 WBP2NLQ6ICG8 309 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 EXD3Q8N9H8 876 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ARRDC2Q8TBH0 407 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 FGGYQ96C11 551 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ZBED3Q96IU2 234 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 LCORQ96JN0 433 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 NLKQ9UBE8 527 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SLC35A3Q9Y2D2 325 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 FAM208AQ9UK61 1670 aaKnown RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 PMP2P02689 132 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 TP53P04637 393 aaPredicted RBP7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SLC1A3P43003 542 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 FABP6P51161 128 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 388.3 ms