RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 TBL1XR1Q9BZK7 514 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 SRA1Q9HD15 236 aaKnown RBP13.32□□□□□ -0.28
SMG8-201ENST00000300917 COPS7AQ9UBW8 275 aa13.32□□□□□ -0.28
SMG8-201ENST00000300917 PLEKHB1Q9UF11 243 aaPredicted RBP13.32□□□□□ -0.28
SMG8-201ENST00000300917 EXOGQ9Y2C4 368 aaKnown RBP13.32□□□□□ -0.28
SMG8-201ENST00000300917 IGKV1D-42A0A075B6H8 117 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 TMEM265A0A087WTH1 108 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 CCDC182A6NF36 153 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 NDUFB5O43674 189 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 GABRA5P31644 462 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 GPR143P51810 404 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 ZNF117Q03924 483 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 EBPQ15125 230 aaKnown RBP13.31□□□□□ -0.28
SMG8-201ENST00000300917 VASNQ6EMK4 673 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 QSOX2Q6ZRP7 698 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 CADM3Q8N126 398 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 ZNF527Q8NB42 609 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 SLC25A46Q96AG3 418 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 SLC46A1Q96NT5 459 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 ZNF426Q9BUY5 554 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 PPIL3Q9H2H8 161 aaKnown RBP13.31□□□□□ -0.28
SMG8-201ENST00000300917 ADGRL4Q9HBW9 690 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 RPRD1BQ9NQG5 326 aaKnown RBP13.31□□□□□ -0.28
SMG8-201ENST00000300917 NANSQ9NR45 359 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 PCNX3Q9H6A9 2034 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 IDSB3KWA1 339 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 IGHA1P01876 353 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 ELAVL1Q15717 326 aaKnown RBP13.31□□□□□ -0.28
SMG8-201ENST00000300917 BAK1Q16611 211 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 NIPAL1Q6NVV3 410 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 CCDC190Q86UF4 302 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 ZNF511Q8NB15 262 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 CEP76Q8TAP6 659 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 SLC41A2Q96JW4 573 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 NECAB3Q96P71 396 aaPredicted RBP13.31□□□□□ -0.28
SMG8-201ENST00000300917 SDHCQ99643 169 aaPredicted RBP13.31□□□□□ -0.28
SMG8-201ENST00000300917 TIMP4Q99727 224 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 PCED1AQ9H1Q7 454 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 GAREM1Q9H706 876 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 BABAM2Q9NXR7 383 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 OR6C68A6NDL8 312 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 SLC22A31A6NKX4 558 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 EFCAB7A8K855 629 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 GPANK1O95872 356 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 IFNGP01579 166 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 IGKV3-11P04433 115 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 PSMD4P55036 377 aaKnown RBP13.31□□□□□ -0.28
SMG8-201ENST00000300917 SKP2Q13309 424 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 PWWP2BQ6NUJ5 590 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 LEG1Q6P5S2 330 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 ADIPOR1Q96A54 375 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 OMA1Q96E52 524 aa13.31□□□□□ -0.28
SMG8-201ENST00000300917 IGKV3D-11A0A0A0MRZ8 115 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 IL33O95760 270 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 TFP02787 698 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 AHCYP23526 432 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 SHC1P29353 583 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 GRK6P43250 576 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 MAGEB1P43366 347 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 GPLD1P80108 840 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 ZNF45Q02386 682 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 RNLSQ5VYX0 342 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 OR5W2Q8NH69 310 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 DNAJA4Q8WW22 397 aaPredicted RBP13.3□□□□□ -0.28
SMG8-201ENST00000300917 GTPBP2Q9BX10 602 aaKnown RBP13.3□□□□□ -0.28
SMG8-201ENST00000300917 CMAHPQ9Y471 501 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 SDK2Q58EX2 2172 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 EML5Q05BV3 1969 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 TCRBV16S1A1N1A0A5B0 115 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 TAF4O00268 1085 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 TMCC2O75069 709 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 ABCD3P28288 659 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 CTXN1P60606 82 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 ZNF85Q03923 595 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMG8-201ENST00000300917 BICRALQ6AI39 1079 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 TMEM91Q6ZNR0 172 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 GDPGP1Q6ZNW5 385 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 SLC29A4Q7RTT9 530 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 DUSP19Q8WTR2 217 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 DAZLQ92904 295 aaKnown RBP13.3□□□□□ -0.28
SMG8-201ENST00000300917 MIXL1Q9H2W2 232 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 ZMIZ1Q9ULJ6 1067 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 BDP1A6H8Y1 2624 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 TVP23AA6NH52 213 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 RNF13O43567 381 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 HPGDSO60760 199 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 ZNF354AO60765 605 aaPredicted RBP13.3□□□□□ -0.28
SMG8-201ENST00000300917 OPN1LWP04000 364 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 HLA-DPB1P04440 258 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 EPHA8P29322 1005 aaPredicted RBP13.3□□□□□ -0.28
SMG8-201ENST00000300917 PSPHP78330 225 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 LTBQ06643 244 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 TMEM44Q2T9K0 475 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 WBP2NLQ6ICG8 309 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 ARHGAP11AQ6P4F7 1023 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 FAM199XQ6PEV8 388 aaPredicted RBP13.3□□□□□ -0.28
SMG8-201ENST00000300917 KDM8Q8N371 416 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 OR1F2PQ96R84 312 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 WWTR1Q9GZV5 400 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms