RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 HYKKA2RU49 373 aa13.73□□□□□ -0.21
CDH23-202ENST00000299366 LINC01553A4QN01 128 aa13.73□□□□□ -0.21
CDH23-202ENST00000299366 METRNLQ641Q3 311 aa13.73□□□□□ -0.21
CDH23-202ENST00000299366 RPL13AP3Q6NVV1 102 aa13.73□□□□□ -0.21
CDH23-202ENST00000299366 TP53I13Q8NBR0 393 aaPredicted RBP13.73□□□□□ -0.21
CDH23-202ENST00000299366 MR1Q95460 341 aa13.73□□□□□ -0.21
CDH23-202ENST00000299366 MS4A6EQ96DS6 147 aa13.73□□□□□ -0.21
CDH23-202ENST00000299366 CD93Q9NPY3 652 aa13.73□□□□□ -0.21
CDH23-202ENST00000299366 SAGE1Q9NXZ1 904 aa13.73□□□□□ -0.21
CDH23-202ENST00000299366 ANKRD31Q8N7Z5 1873 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 RAB3DO95716 219 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 F10P00742 488 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 MAGEB1P43366 347 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 OR7A5Q15622 319 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 MFSD12Q6NUT3 480 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 LYPD8Q6UX82 237 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 LINC00346Q8IVM7 164 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 SIMC1Q8NDZ2 872 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 DAZLQ92904 295 aaKnown RBP13.72□□□□□ -0.21
CDH23-202ENST00000299366 SNX18Q96RF0 628 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 SLC52A3Q9NQ40 469 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 FBXO9Q9UK97 447 aaPredicted RBP13.72□□□□□ -0.21
CDH23-202ENST00000299366 V9GY05 133 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 DISC1C4P0D8 188 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 SLC2A1P11166 492 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 FBLP22087 321 aaKnown RBP13.72□□□□□ -0.21
CDH23-202ENST00000299366 GDNFP39905 211 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 CSNK1EP49674 416 aaKnown RBP13.72□□□□□ -0.21
CDH23-202ENST00000299366 TLE3Q04726 772 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 MELKQ14680 651 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 SLC22A6Q4U2R8 563 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 SMUG1Q53HV7 270 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 PRAMEF8Q5VWM4 474 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 PRAMEF7Q5VXH5 474 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 TMEM17Q86X19 198 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 OR6F1Q8NGZ6 308 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 NR4A3Q92570 626 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 TSNAXQ99598 290 aaKnown RBP13.72□□□□□ -0.21
CDH23-202ENST00000299366 C6orf106Q9H6K1 298 aaPredicted RBP13.72□□□□□ -0.21
CDH23-202ENST00000299366 NOX3Q9HBY0 568 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 COPS3Q9UNS2 423 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 OR51B4Q9Y5P0 310 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 WDR87Q6ZQQ6 2873 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 RLN2P04090 185 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 ELK1P19419 428 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 HOXA9P31269 272 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 SRSF5Q13243 272 aaKnown RBP13.72□□□□□ -0.21
CDH23-202ENST00000299366 RAB11BQ15907 218 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 CDKN3Q16667 212 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 OR51D1Q8NGF3 324 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 RBM24Q9BX46 236 aaKnown RBP13.72□□□□□ -0.21
CDH23-202ENST00000299366 ELOVL3Q9HB03 270 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 PPP4R1LQ9P1A2 415 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 DIMT1Q9UNQ2 313 aaKnown RBP13.72□□□□□ -0.21
CDH23-202ENST00000299366 AP1M2Q9Y6Q5 423 aa13.72□□□□□ -0.21
CDH23-202ENST00000299366 ZAR1LA6NP61 321 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 PRAMEF2O60811 474 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 GLI4P10075 376 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 RORAP35398 523 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 ZFP36L2P47974 494 aaKnown RBP13.71□□□□□ -0.21
CDH23-202ENST00000299366 CXADRP78310 365 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 AIMP2Q13155 320 aaKnown RBP13.71□□□□□ -0.21
CDH23-202ENST00000299366 PDE7AQ13946 482 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 EIF2B1Q14232 305 aaKnown RBP13.71□□□□□ -0.21
CDH23-202ENST00000299366 SLC7A6Q92536 515 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 NXPE2Q96DL1 559 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 ZDHHC12Q96GR4 267 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 SEMA4CQ9C0C4 833 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 ACKR4Q9NPB9 350 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 MRPS17Q9Y2R5 130 aaKnown RBP13.71□□□□□ -0.21
CDH23-202ENST00000299366 FGF17O60258 216 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 CD6P30203 668 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 PSPHP78330 225 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 MESP2Q0VG99 397 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 CDC20Q12834 499 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 EFR3AQ14156 821 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 NANOGP1Q8N7R0 232 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 OR13H1Q8NG92 308 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 FAM3CQ92520 227 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 ST6GALNAC5Q9BVH7 336 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 TMEM14AQ9Y6G1 99 aa13.71□□□□□ -0.21
CDH23-202ENST00000299366 GAPDHSO14556 408 aaPredicted RBP13.71□□□□□ -0.22
CDH23-202ENST00000299366 PGCP20142 388 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 CSRP3P50461 194 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 KCNAB1Q14722 419 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.71□□□□□ -0.22
CDH23-202ENST00000299366 LRRC28Q86X40 367 aaPredicted RBP13.71□□□□□ -0.22
CDH23-202ENST00000299366 GALNT6Q8NCL4 622 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 SLC37A2Q8TED4 501 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 ALG14Q96F25 216 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 LYSMD1Q96S90 227 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 RPP25Q9BUL9 199 aaKnown RBP13.71□□□□□ -0.22
CDH23-202ENST00000299366 ALG12Q9BV10 488 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 MFFQ9GZY8 342 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 OR51B6Q9H340 312 aa13.71□□□□□ -0.22
CDH23-202ENST00000299366 TDRD6O60522 2096 aaKnown RBP13.71□□□□□ -0.22
CDH23-202ENST00000299366 A0A0A6YYH2 397 aa13.7□□□□□ -0.22
CDH23-202ENST00000299366 A6NJ64 397 aa13.7□□□□□ -0.22
CDH23-202ENST00000299366 MRPS14O60783 128 aaKnown RBP13.7□□□□□ -0.22
CDH23-202ENST00000299366 RFPL3O75679 317 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms