RNA–Protein interactions for RNA: ENST00000297267.13

FNDC1-201, Transcript of fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC1, Length 6,552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-201ENST00000297267 CSNK1A1P48729 337 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 AKR1C1Q04828 323 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 SLC14A1Q13336 389 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 SGPP2Q8IWX5 399 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 OR10K1Q8NGX5 313 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 SEMA4GQ9NTN9 838 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 TSPAN11A1L157 253 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 ITGB2P05107 769 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 IMPA1P29218 277 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 SF3A2Q15428 464 aaKnown RBP14.37□□□□□ -0.11
FNDC1-201ENST00000297267 LRRC26Q2I0M4 334 aa14.37□□□□□ -0.11
FNDC1-201ENST00000297267 EFSO43281 561 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 ALPLP05186 524 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 ALDH3B2P48448 385 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 FGL1Q08830 312 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 ABHD17BQ5VST6 288 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 ASB11Q8WXH4 323 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 TPPP3Q9BW30 176 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 APMAPQ9HDC9 416 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 CLDN24A6NM45 220 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 IFNA17P01571 189 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 RRASP10301 218 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 CASP3P42574 277 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 RPS27P42677 84 aaKnown RBP14.36□□□□□ -0.11
FNDC1-201ENST00000297267 STEAP3Q658P3 488 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 CORO6Q6QEF8 472 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 HYLS1Q96M11 299 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 SEC22CQ9BRL7 303 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 BCAT2O15382 392 aaPredicted RBP14.36□□□□□ -0.11
FNDC1-201ENST00000297267 OIP5O43482 229 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 SHEQ5VZ18 495 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 TRMT2BQ96GJ1 504 aaKnown RBP14.36□□□□□ -0.11
FNDC1-201ENST00000297267 LPAR4Q99677 370 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 WDR83Q9BRX9 315 aaKnown RBP14.36□□□□□ -0.11
FNDC1-201ENST00000297267 C1QTNF2Q9BXJ5 285 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 POFUT1Q9H488 388 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 BANF2Q9H503 90 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 ATP13A2Q9NQ11 1180 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 TMEM14AQ9Y6G1 99 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 HS3ST1O14792 307 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 POLR1CO15160 346 aaPredicted RBP14.36□□□□□ -0.11
FNDC1-201ENST00000297267 CACNG3O60359 315 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 GMDSO60547 372 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 ITGAMP11215 1152 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 TACR3P29371 465 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 NUDT1P36639 197 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 PRPS1P60891 318 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 RAB5BP61020 215 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 KCNJ8Q15842 424 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 PHLDA2Q53GA4 152 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 CBLL1Q75N03 491 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 RNF170Q96K19 258 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 DCLRE1CQ96SD1 692 aaKnown RBP14.36□□□□□ -0.11
FNDC1-201ENST00000297267 EMC6Q9BV81 110 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 PUS1Q9Y606 427 aaKnown RBP eCLIP14.36□□□□□ -0.11
FNDC1-201ENST00000297267 K7EPK0 472 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 ZNF623O75123 536 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 MSR1P21757 451 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 RBMS1P29558 406 aaKnown RBP14.36□□□□□ -0.11
FNDC1-201ENST00000297267 BCL6P41182 706 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 SYT9Q86SS6 491 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 FAM71E2Q8N5Q1 922 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 MS4A4AQ96JQ5 239 aa14.36□□□□□ -0.11
FNDC1-201ENST00000297267 MEX3AA1L020 520 aaKnown RBP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 RPS2P15880 293 aaKnown RBP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 KIAA0895LQ68EN5 471 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 ZNF511Q8NB15 262 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 GPR148Q8TDV2 347 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 MUL1Q969V5 352 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 WDR76Q9H967 626 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 SURF4O15260 269 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 KLKB1P03952 638 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 HNRNPA1P09651 372 aaKnown RBP eCLIP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 HIST1H1TP22492 207 aaPredicted RBP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 APEX1P27695 318 aaKnown RBP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 IDH3GP51553 393 aaPredicted RBP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 C3P1Q6ZMU1 363 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 LIPHQ8WWY8 451 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 SEMA4CQ9C0C4 833 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 SLC23A2Q9UGH3 650 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 DDX60LQ5H9U9 1706 aaKnown RBP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 PCSK6P29122 969 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 RFC3P40938 356 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 HTR5AP47898 357 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 GIPRP48546 466 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 OR5L2Q8NGL0 311 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 SLA2Q9H6Q3 261 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 MYNNQ9NPC7 610 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 CEBPZOSA8MTT3 80 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 SOX15O60248 233 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 DAP3P51398 398 aaKnown RBP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 RNF4P78317 190 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 CLINT1Q14677 625 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 PGAP3Q96FM1 320 aaPredicted RBP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 SPACA5Q96QH8 159 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 VN1R3Q9BXE9 311 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 NOX4Q9NPH5 578 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 CNOT11Q9UKZ1 510 aaKnown RBP14.35□□□□□ -0.11
FNDC1-201ENST00000297267 HCFC2Q9Y5Z7 792 aa14.35□□□□□ -0.11
FNDC1-201ENST00000297267 LRRC37A3O60309 1634 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms