RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 C5orf34Q96MH7 638 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 JAM3Q9BX67 310 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 NDUFB11Q9NX14 153 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 RASD1Q9Y272 281 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 SLC35A3Q9Y2D2 325 aa8.54□□□□□ -1.04
PRDM9-201ENST00000296682 A0A1B0GTH9 108 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 SLC22A31A6NKX4 558 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 RNF13O43567 381 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 OR8G3PP0DMU2 310 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 HTR1FP30939 366 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 CCR5P51681 352 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 C14orf28Q4W4Y0 310 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ACSM3Q53FZ2 586 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 HES5Q5TA89 166 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 AADACL4Q5VUY2 407 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 HEPHL1Q6MZM0 1159 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 KANSL1Q7Z3B3 1105 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 SLC35F3Q8IY50 421 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 YIPF7Q8N8F6 280 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 C17orf47Q8NEP4 570 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 OR5J2Q8NH18 312 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 KLHDC3Q9BQ90 382 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 OR11A1Q9GZK7 315 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 GRHPRQ9UBQ7 328 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 SIGLEC7Q9Y286 467 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 TP53BP1Q12888 1972 aaPredicted RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 HEATR5AQ86XA9 2040 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 TMEM72A0PK05 275 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 SHISA8B8ZZ34 492 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 POLR1CO15160 346 aaPredicted RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 EEF1E1O43324 174 aaKnown RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 GDF9O60383 454 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 CT45A8P0DMV1 189 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 CT45A9P0DMV2 189 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 RORAP35398 523 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 TOMM34Q15785 309 aaPredicted RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 CT45A2Q5DJT8 189 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 NIPAL3Q6P499 406 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 PAMR1Q6UXH9 720 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ZNF517Q6ZMY9 492 aaPredicted RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 SLC29A4Q7RTT9 530 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 PLXDC1Q8IUK5 500 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 GID4Q8IVV7 300 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ZNF595Q8IYB9 648 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 GPR119Q8TDV5 335 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 METTL21AQ8WXB1 218 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 SMOC1Q9H4F8 434 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 PRODH2Q9UF12 536 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 NUFIP1Q9UHK0 495 aaKnown RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 TMEM5Q9Y2B1 443 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 TLCD2A6NGC4 264 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 TAF4O00268 1085 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 XKRYO14609 159 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ICOSLGO75144 302 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 UTS2O95399 124 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 THBS1P07996 1170 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 UBL4AP11441 157 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 NME1P15531 152 aaKnown RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 GAS1P54826 345 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 LGALS3BPQ08380 585 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 CDC20Q12834 499 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ZNF181Q2M3W8 571 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 MZT2AQ6P582 158 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 SSX6Q7RTT6 188 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ZNF527Q8NB42 609 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 OR5M1Q8NGP8 315 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 OR1L3Q8NH93 324 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ZPLD1Q8TCW7 415 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ASB15Q8WXK1 588 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 GCDHQ92947 438 aaPredicted RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 MOGAT1Q96PD6 335 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 OR6C1Q96RD1 312 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ARHGAP9Q9BRR9 750 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 ULBP3Q9BZM4 244 aa8.53□□□□□ -1.04
PRDM9-201ENST00000296682 CCDC59Q9P031 241 aaKnown RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 TESQ9UGI8 421 aaKnown RBP8.53□□□□□ -1.04
PRDM9-201ENST00000296682 PCDH15Q96QU1 1955 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 A0A075B6Q4 140 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 G3V3Y1 287 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 CHP2O43745 196 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 NKX2-2O95096 273 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 SBK2P0C263 348 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 SNRPBP14678 240 aaKnown RBP8.52□□□□□ -1.04
PRDM9-201ENST00000296682 TGM1P22735 817 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 CD97P48960 835 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 GBX2P52951 348 aaPredicted RBP8.52□□□□□ -1.04
PRDM9-201ENST00000296682 HSD11B2P80365 405 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 MGAT2Q10469 447 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 QPRTQ15274 297 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 ALG10Q5BKT4 473 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 TCTE1Q5JU00 501 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 EID2Q8N6I1 236 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 STACQ99469 402 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 KCNN2Q9H2S1 579 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 UBQLN4Q9NRR5 601 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 CENPMQ9NSP4 180 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 MCUBQ9NWR8 336 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 DNAJB12Q9NXW2 375 aaKnown RBP8.52□□□□□ -1.04
PRDM9-201ENST00000296682 SIT1Q9Y3P8 196 aa8.52□□□□□ -1.04
PRDM9-201ENST00000296682 FAM221BA6H8Z2 402 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms