RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ST3GAL4Q11206 333 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 IRF3Q14653 427 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 TBCEQ15813 527 aaPredicted RBP14.17□□□□□ -0.14
LSM6-201ENST00000296581 ELOA3BQ3SY89 546 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 CEP78Q5JTW2 689 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 AKAP14Q86UN6 197 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 ELOA3Q8NG57 546 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 LRR1Q96L50 414 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 ZNF582Q96NG8 517 aaPredicted RBP14.17□□□□□ -0.14
LSM6-201ENST00000296581 ENKD1Q9H0I2 346 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 FOXJ2Q9P0K8 574 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 TCFL5Q9UL49 500 aa14.17□□□□□ -0.14
LSM6-201ENST00000296581 CLDN25C9JDP6 229 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 OR2J2O76002 312 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 TCN2P20062 427 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 ZNF91Q05481 1191 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 CBFBQ13951 182 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 SYT6Q5T7P8 510 aaPredicted RBP14.16□□□□□ -0.14
LSM6-201ENST00000296581 STPG1Q5TH74 334 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 NDUFAF7Q7L592 441 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 BCDIN3DQ7Z5W3 292 aaKnown RBP14.16□□□□□ -0.14
LSM6-201ENST00000296581 OAFQ86UD1 273 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 CYP4Z2PQ8N1L4 340 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 LNX2Q8N448 690 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 STX19Q8N4C7 294 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 ANGPTL6Q8NI99 470 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 RORBQ92753 470 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 DHRS9Q9BPW9 319 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 IL20RAQ9UHF4 553 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 PCNX3Q9H6A9 2034 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 TRAV27A0A087WT01 109 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.16□□□□□ -0.14
LSM6-201ENST00000296581 FAM172BPA6NC97 362 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 KDM4EB2RXH2 506 aaPredicted RBP14.16□□□□□ -0.14
LSM6-201ENST00000296581 DBTP11182 482 aaKnown RBP14.16□□□□□ -0.14
LSM6-201ENST00000296581 TACR3P29371 465 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 SLC9A3P48764 834 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 GAS1P54826 345 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 DNASE1L3Q13609 305 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 TMEM164Q5U3C3 297 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 UBE2UQ5VVX9 321 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 THSD4Q6ZMP0 1018 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 SLC46A3Q7Z3Q1 461 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 PPP1R32Q7Z5V6 425 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 OR5M3Q8NGP4 307 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 DUSP19Q8WTR2 217 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 RASL10BQ96S79 203 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 CDCA4Q9BXL8 241 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 MCCC2Q9HCC0 563 aa14.16□□□□□ -0.14
LSM6-201ENST00000296581 MPDZO75970 2070 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 CDC40O60508 579 aaKnown RBP eCLIP14.15□□□□□ -0.14
LSM6-201ENST00000296581 OR7A10O76100 309 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 CH25HO95992 272 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 CELA2AP08217 269 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 ITPKBP27987 946 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 GNG2P59768 71 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 TOMM34Q15785 309 aaPredicted RBP14.15□□□□□ -0.14
LSM6-201ENST00000296581 NTRK2Q16620 822 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 OR51A7Q8NH64 312 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 GPR119Q8TDV5 335 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 LIPHQ8WWY8 451 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 FCGR1BQ92637 280 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 TXNDC15Q96J42 360 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 TNFRSF13CQ96RJ3 184 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 FARSAQ9Y285 508 aaKnown RBP14.15□□□□□ -0.14
LSM6-201ENST00000296581 GPR52Q9Y2T5 361 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 NSG1A0A0A6YYJ2 146 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 PRODHO43272 600 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 IDH3BO43837 385 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 NBL1P41271 181 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 IFITM3Q01628 133 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 C17orf67Q0P5P2 114 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 C3orf38Q5JPI3 329 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 AADACL4Q5VUY2 407 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 RTL4Q6ZR62 310 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 C9orf43Q8TAL5 461 aaPredicted RBP14.15□□□□□ -0.14
LSM6-201ENST00000296581 SPACA9Q96E40 222 aaPredicted RBP14.15□□□□□ -0.14
LSM6-201ENST00000296581 NEK6Q9HC98 313 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 OSGIN1Q9UJX0 560 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 BAIAP2Q9UQB8 552 aa14.15□□□□□ -0.14
LSM6-201ENST00000296581 ADRA2AP08913 450 aa14.14□□□□□ -0.15
LSM6-201ENST00000296581 SUMO3P55854 103 aaPredicted RBP14.14□□□□□ -0.15
LSM6-201ENST00000296581 RPS18P62269 152 aaKnown RBP14.14□□□□□ -0.15
LSM6-201ENST00000296581 EGR4Q05215 589 aa14.14□□□□□ -0.15
LSM6-201ENST00000296581 SSPNQ14714 243 aa14.14□□□□□ -0.15
LSM6-201ENST00000296581 TMEM44Q2T9K0 475 aa14.14□□□□□ -0.15
LSM6-201ENST00000296581 COL28A1Q2UY09 1125 aa14.14□□□□□ -0.15
LSM6-201ENST00000296581 PLEKHG7Q6ZR37 379 aa14.14□□□□□ -0.15
LSM6-201ENST00000296581 LRFN3Q9BTN0 628 aa14.14□□□□□ -0.15
LSM6-201ENST00000296581 FN3KQ9H479 309 aa14.14□□□□□ -0.15
LSM6-201ENST00000296581 MRPS18AQ9NVS2 196 aaKnown RBP14.14□□□□□ -0.15
LSM6-201ENST00000296581 ZNF337Q9Y3M9 751 aa14.14□□□□□ -0.15
LSM6-201ENST00000296581 SNTNA6NMZ2 147 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 GP1BBP13224 206 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 SLC6A6P31641 620 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 PTGDSP41222 190 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 TMBIM6P55061 237 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 QPRTQ15274 297 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 ZNF74Q16587 644 aa14.13□□□□□ -0.15
LSM6-201ENST00000296581 ZNF791Q3KP31 576 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms