RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 PCDHGB2Q9Y5G2 931 aa10.77□□□□□ -0.69
RHO-201ENST00000296271 TEX13CA0A0J9YWL9 993 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 MEIOCA2RUB1 952 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 ANKRD61A6NGH8 418 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 A6NL46 340 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 RHPN2P1A8MT19 583 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 H3BMH7 237 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 IMPDH2P12268 514 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 GLULP15104 373 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 CSF2RBP32927 897 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 THBS2P35442 1172 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 CDKN2AP42771 156 aaKnown RBP10.76□□□□□ -0.69
RHO-201ENST00000296271 COPZ1P61923 177 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 EGR4Q05215 589 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 SCN1BQ07699 218 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 SF3B4Q15427 424 aaKnown RBP eCLIP10.76□□□□□ -0.69
RHO-201ENST00000296271 TMEM44Q2T9K0 475 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 PAMR1Q6UXH9 720 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 NPEPL1Q8NDH3 523 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 OR5H6Q8NGV6 325 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 CHAC2Q8WUX2 184 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 HSD17B8Q92506 261 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 KTI12Q96EK9 354 aaPredicted RBP10.76□□□□□ -0.69
RHO-201ENST00000296271 PELI1Q96FA3 418 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 DEPDC7Q96QD5 511 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 NDC1Q9BTX1 674 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 HOXD1Q9GZZ0 328 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 CEP192Q8TEP8 1941 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 CNTRLQ7Z7A1 2325 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 A0A0G2JK05 382 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 A0A1B0GTH9 108 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 TMEM221A6NGB7 291 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 TLCD2A6NGC4 264 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 B4DXG7 233 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 ZNF749O43361 778 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 DYRK3O43781 588 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 ICOSLGO75144 302 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 NDUFB2O95178 105 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 MT-ND5P03915 603 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 ATAD3CQ5T2N8 411 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 LANCL3Q6ZV70 420 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 OR6F1Q8NGZ6 308 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 C1orf216Q8TAB5 229 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 ITPKCQ96DU7 683 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 SOSTQ9BQB4 213 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 WACQ9BTA9 647 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 NUDT9Q9BW91 350 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 JAM3Q9BX67 310 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 MKKSQ9NPJ1 570 aaPredicted RBP10.76□□□□□ -0.69
RHO-201ENST00000296271 NUFIP1Q9UHK0 495 aaKnown RBP10.76□□□□□ -0.69
RHO-201ENST00000296271 ST6GALNAC2Q9UJ37 374 aa10.76□□□□□ -0.69
RHO-201ENST00000296271 ING1Q9UK53 422 aaPredicted RBP10.76□□□□□ -0.69
RHO-201ENST00000296271 PAIP2BQ9ULR5 123 aaKnown RBP10.76□□□□□ -0.69
RHO-201ENST00000296271 C2orf72A6NCS6 295 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 UTS2O95399 124 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 HSD17B7P56937 341 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 RACK1P63244 317 aaKnown RBP10.75□□□□□ -0.69
RHO-201ENST00000296271 C14orf28Q4W4Y0 310 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 ACSM3Q53FZ2 586 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 ASB18Q6ZVZ8 466 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 ZNF550Q7Z398 422 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 TMPRSS9Q7Z410 1059 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 SLC7A5P1Q8MH63 180 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 SLC25A45Q8N413 288 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 SAMD12Q8N8I0 201 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 OR4M1Q8NGD0 313 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 FAM174AQ8TBP5 190 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 FYTTD1Q96QD9 318 aaKnown RBP10.75□□□□□ -0.69
RHO-201ENST00000296271 G6PC3Q9BUM1 346 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 RPRD1BQ9NQG5 326 aaKnown RBP10.75□□□□□ -0.69
RHO-201ENST00000296271 SLC2A4RGQ9NR83 387 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 NLKQ9UBE8 527 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 EXTL2Q9UBQ6 330 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 GNG8Q9UK08 70 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 KLHDC2Q9Y2U9 406 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 MN1Q10571 1320 aaPredicted RBP10.75□□□□□ -0.69
RHO-201ENST00000296271 PI4KAP42356 2102 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 LILRA5A6NI73 299 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 LMO7DNF2Z398 122 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 PLPP2O43688 288 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 ZNF217O75362 1048 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 DCNP07585 359 aaKnown RBP10.75□□□□□ -0.69
RHO-201ENST00000296271 HPGDP15428 266 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 PPP3R1P63098 170 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 SKP2Q13309 424 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 FNDC7Q5VTL7 733 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 OR5M10Q6IEU7 315 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 TSSK4Q6SA08 328 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 NCCRP1Q6ZVX7 275 aaPredicted RBP10.75□□□□□ -0.69
RHO-201ENST00000296271 MARCH3Q86UD3 253 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 C17orf82Q86X59 251 aaPredicted RBP10.75□□□□□ -0.69
RHO-201ENST00000296271 SLC35F3Q8IY50 421 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 SIX5Q8N196 739 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 SLC2A12Q8TD20 617 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 UBASH3BQ8TF42 649 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 CAPSLQ8WWF8 208 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 AP3S1Q92572 193 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 AHCYL2Q96HN2 611 aaKnown RBP10.75□□□□□ -0.69
RHO-201ENST00000296271 OR14A2Q96R54 314 aa10.75□□□□□ -0.69
RHO-201ENST00000296271 ENAMQ9NRM1 1142 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms