RNA–Protein interactions for RNA: ENST00000293778.10

CXCL16-201, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 2,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-201ENST00000293778 SYNDIG1Q9H7V2 258 aa18.28■□□□□ 0.52
CXCL16-201ENST00000293778 KLHL1Q9NR64 748 aa18.28■□□□□ 0.52
CXCL16-201ENST00000293778 DHCR7Q9UBM7 475 aaKnown RBP18.28■□□□□ 0.52
CXCL16-201ENST00000293778 PCDH15Q96QU1 1955 aa18.28■□□□□ 0.52
CXCL16-201ENST00000293778 HLA-DQB1P01920 261 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 PRPS1P60891 318 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 ACTA2P62736 377 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 ERVK-25P63136 954 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 ACTG2P63267 376 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 RIN1Q13671 783 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 CBLN3Q6UW01 205 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 ATG4DQ86TL0 474 aaPredicted RBP18.27■□□□□ 0.52
CXCL16-201ENST00000293778 TPRA1Q86W33 373 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 GHDCQ8N2G8 530 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 MS4A15Q8N5U1 240 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 NPEPL1Q8NDH3 523 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 C19orf18Q8NEA5 215 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 GHSRQ92847 366 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 MVB12AQ96EY5 273 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 EXOSC3Q9NQT5 275 aaKnown RBP18.27■□□□□ 0.52
CXCL16-201ENST00000293778 ST6GALNAC2Q9UJ37 374 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 IGHV1OR21-1A0A087WYE8 117 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 IGKV3D-11A0A0A0MRZ8 115 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 HTR3EA5X5Y0 456 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 SC5DO75845 299 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 ELK1P19419 428 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 GRK6P43250 576 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 DIO1P49895 249 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 SMAD2Q15796 467 aaKnown RBP18.27■□□□□ 0.52
CXCL16-201ENST00000293778 ISXQ2M1V0 245 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 ACSM3Q53FZ2 586 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 RSBN1Q5VWQ0 802 aaPredicted RBP18.27■□□□□ 0.52
CXCL16-201ENST00000293778 APOOLQ6UXV4 268 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 PXKQ7Z7A4 578 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 RASD2Q96D21 266 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 LCORQ96JN0 433 aaPredicted RBP18.27■□□□□ 0.52
CXCL16-201ENST00000293778 B3GAT2Q9NPZ5 323 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 PCDHGB7Q9Y5F8 929 aa18.27■□□□□ 0.52
CXCL16-201ENST00000293778 HEATR5AQ86XA9 2040 aa18.27■□□□□ 0.51
CXCL16-201ENST00000293778 FRG2CA6NGY1 282 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 MAGEB4O15481 346 aaPredicted RBP18.26■□□□□ 0.51
CXCL16-201ENST00000293778 ZNF264O43296 627 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 IDH3BO43837 385 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 RPS5P46782 204 aaKnown RBP18.26■□□□□ 0.51
CXCL16-201ENST00000293778 SNAP47Q5SQN1 464 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 RDH10Q8IZV5 341 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 SYS1Q8N2H4 156 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 C10orf53Q8N6V4 93 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 MOSPD2Q8NHP6 518 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 ZNRF4Q8WWF5 429 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 KCTD12Q96CX2 325 aaKnown RBP18.26■□□□□ 0.51
CXCL16-201ENST00000293778 DDOQ99489 341 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 POU2F3Q9UKI9 436 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 TRIOO75962 3097 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 MEIOCA2RUB1 952 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 OR6C68A6NDL8 312 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 IGKV3-11P04433 115 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 SPI1P17947 270 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 GBX2P52951 348 aaPredicted RBP18.26■□□□□ 0.51
CXCL16-201ENST00000293778 PRAMEF17Q5VTA0 474 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 UBE2J2Q8N2K1 259 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 OR1L3Q8NH93 324 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 OR14A16Q8NHC5 309 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 ENKURQ8TC29 256 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 ZPLD1Q8TCW7 415 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 SNX33Q8WV41 574 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 GAL3ST4Q96RP7 486 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 GPX7Q96SL4 187 aaPredicted RBP18.26■□□□□ 0.51
CXCL16-201ENST00000293778 TMEM43Q9BTV4 400 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 NMNAT2Q9BZQ4 307 aa18.26■□□□□ 0.51
CXCL16-201ENST00000293778 MRTO4Q9UKD2 239 aaKnown RBP18.26■□□□□ 0.51
CXCL16-201ENST00000293778 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 A0A1W2PRG6 482 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 B4DXG7 233 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 BLOC1S5-TXNDC5H3BN57 136 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 IMPA2O14732 288 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 OGG1O15527 345 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 DDAH2O95865 285 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 IGF2P01344 180 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 OR10A3P58181 314 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 ZNF74Q16587 644 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 CDONQ4KMG0 1287 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 SLC35D3Q5M8T2 416 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 SFXN4Q6P4A7 337 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 PLXDC1Q8IUK5 500 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 PRR22Q8IZ63 422 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 CARFQ8N187 725 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 OR13C5Q8NGS8 318 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 ZNF721Q8TF20 911 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 PELI1Q96FA3 418 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 ADOQ96SZ5 270 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 EXTL2Q9UBQ6 330 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 THBS2P35442 1172 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 AQP2P41181 271 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 KIR2DL3P43628 341 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 MAP2K3P46734 347 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 CFHR1Q03591 330 aa18.25■□□□□ 0.51
CXCL16-201ENST00000293778 ELAVL1Q15717 326 aaKnown RBP18.25■□□□□ 0.51
CXCL16-201ENST00000293778 LRRC28Q86X40 367 aaPredicted RBP18.25■□□□□ 0.51
CXCL16-201ENST00000293778 OR6K6Q8NGW6 343 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms