RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 CYTIPO60759 359 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 PRKD3O94806 890 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 TCN1P20061 433 aaPredicted RBP24.02■■□□□ 1.44
SSU72-201ENST00000291386 CDH12P55289 794 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 SLC35A1P78382 337 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 H3F3AP84243 136 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 C1orf140Q5VVS0 124 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 FAM214BQ7L5A3 538 aa24.02■■□□□ 1.44
SSU72-201ENST00000291386 DCAF13Q9NV06 445 aaKnown RBP24.02■■□□□ 1.44
SSU72-201ENST00000291386 PRPF19Q9UMS4 504 aaKnown RBP24.02■■□□□ 1.44
SSU72-201ENST00000291386 TRAPPC13A5PLN9 417 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 NKX2-6A6NCS4 301 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 LIPT2A6NK58 231 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 CPSF4LA6NMK7 179 aaKnown RBP24.01■■□□□ 1.43
SSU72-201ENST00000291386 EIF1BO60739 113 aaKnown RBP24.01■■□□□ 1.43
SSU72-201ENST00000291386 FZD7O75084 574 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 LYPD3O95274 346 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 TNFRSF1BP20333 461 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 FBXL19-AS1Q494R0 122 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 VTCN1Q7Z7D3 282 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 TSPYL5Q86VY4 417 aaPredicted RBP24.01■■□□□ 1.43
SSU72-201ENST00000291386 STARD4Q96DR4 205 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 CHST11Q9NPF2 352 aa24.01■■□□□ 1.43
SSU72-201ENST00000291386 IGKV1D-42A0A075B6H8 117 aa24■■□□□ 1.43
SSU72-201ENST00000291386 PRSS44E7EML9 344 aa24■■□□□ 1.43
SSU72-201ENST00000291386 ZNF682O95780 498 aa24■■□□□ 1.43
SSU72-201ENST00000291386 THY1P04216 161 aa24■■□□□ 1.43
SSU72-201ENST00000291386 GPIP06744 558 aa24■■□□□ 1.43
SSU72-201ENST00000291386 OR1E2P47887 323 aa24■■□□□ 1.43
SSU72-201ENST00000291386 ASCL1P50553 236 aa24■■□□□ 1.43
SSU72-201ENST00000291386 OR2B6P58173 313 aa24■■□□□ 1.43
SSU72-201ENST00000291386 PDK3Q15120 406 aa24■■□□□ 1.43
SSU72-201ENST00000291386 IFI44LQ53G44 452 aa24■■□□□ 1.43
SSU72-201ENST00000291386 ABLIM2Q6H8Q1 611 aa24■■□□□ 1.43
SSU72-201ENST00000291386 MCEMP1Q8IX19 187 aa24■■□□□ 1.43
SSU72-201ENST00000291386 MFSD8Q8NHS3 518 aa24■■□□□ 1.43
SSU72-201ENST00000291386 ABHD3Q8WU67 409 aa24■■□□□ 1.43
SSU72-201ENST00000291386 GEMIN6Q8WXD5 167 aaKnown RBP24■■□□□ 1.43
SSU72-201ENST00000291386 MPP4Q96JB8 637 aa24■■□□□ 1.43
SSU72-201ENST00000291386 HSH2DQ96JZ2 352 aa24■■□□□ 1.43
SSU72-201ENST00000291386 TACO1Q9BSH4 297 aaKnown RBP24■■□□□ 1.43
SSU72-201ENST00000291386 TMEM43Q9BTV4 400 aa24■■□□□ 1.43
SSU72-201ENST00000291386 PTDSS2Q9BVG9 487 aa24■■□□□ 1.43
SSU72-201ENST00000291386 BCO1Q9HAY6 547 aa24■■□□□ 1.43
SSU72-201ENST00000291386 KLHL9Q9P2J3 617 aa24■■□□□ 1.43
SSU72-201ENST00000291386 SAMD4AQ9UPU9 718 aaKnown RBP24■■□□□ 1.43
SSU72-201ENST00000291386 SNX13Q9Y5W8 968 aa24■■□□□ 1.43
SSU72-201ENST00000291386 IGHV3-15A0A0B4J1V0 119 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 OR2T1O43869 369 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 OR5F1O95221 314 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 AHSA1O95433 338 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 PLGP00747 810 aaPredicted RBP23.99■■□□□ 1.43
SSU72-201ENST00000291386 CGAP01215 116 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 BNIP1Q12981 228 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 PAQR6Q6TCH4 344 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 OR6K3Q8NGY3 331 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 OR6S1Q8NH40 331 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 PSD2Q9BQI7 771 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 NAA11Q9BSU3 229 aaPredicted RBP23.99■■□□□ 1.43
SSU72-201ENST00000291386 TAPBPLQ9BX59 468 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 KLHL13Q9P2N7 655 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 ING1Q9UK53 422 aaPredicted RBP23.99■■□□□ 1.43
SSU72-201ENST00000291386 EMC9Q9Y3B6 208 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 COL12A1Q99715 3063 aa23.99■■□□□ 1.43
SSU72-201ENST00000291386 FTCDNL1E5RQL4 147 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 ARPC2O15144 300 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 THRBP10828 461 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 CD8BP10966 210 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 KLK2P20151 261 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 FPR1P21462 350 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 VWA1Q6PCB0 445 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 DEF8Q6ZN54 512 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 LSRQ86X29 649 aaPredicted RBP23.98■■□□□ 1.43
SSU72-201ENST00000291386 CNEP1R1Q8N9A8 125 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 ACBD4Q8NC06 268 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 PIGXQ8TBF5 258 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 SLC7A6OSQ96CW6 309 aaPredicted RBP23.98■■□□□ 1.43
SSU72-201ENST00000291386 KTI12Q96EK9 354 aaPredicted RBP23.98■■□□□ 1.43
SSU72-201ENST00000291386 DNAJA3Q96EY1 480 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 SLC41A3Q96GZ6 507 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 ZNF426Q9BUY5 554 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 AMBRA1Q9C0C7 1298 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 MUC13Q9H3R2 512 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 SLC7A7Q9UM01 511 aa23.98■■□□□ 1.43
SSU72-201ENST00000291386 TRAV36DV7A0A075B6V5 113 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 MSTNO14793 375 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 IFNW1P05000 195 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 GRNP28799 593 aaKnown RBP23.97■■□□□ 1.43
SSU72-201ENST00000291386 AGTR1P30556 359 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 MSX2P35548 267 aaPredicted RBP23.97■■□□□ 1.43
SSU72-201ENST00000291386 CTBP2P56545 445 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 RASGEF1BQ0VAM2 473 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 OR7A5Q15622 319 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 FKBP9P1Q75LS8 142 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 GDF7Q7Z4P5 450 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 BTLAQ7Z6A9 289 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 RNF217Q8TC41 542 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 EPYCQ99645 322 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 PLSCR4Q9NRQ2 329 aa23.97■■□□□ 1.43
SSU72-201ENST00000291386 ACTR3BQ9P1U1 418 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms