RNA–Protein interactions for RNA: ENST00000278385.10

CD44-202, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-202ENST00000278385 MYLPFQ96A32 169 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 SCRN2Q96FV2 425 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 C9orf72Q96LT7 481 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 SLC38A2Q96QD8 506 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 MCRIP2Q9BUT9 160 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 SEMA6AQ9H2E6 1030 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 SLC38A1Q9H2H9 487 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 RIMS4Q9H426 269 aaPredicted RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 RHOJQ9H4E5 214 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ZSCAN16Q9H4T2 348 aaPredicted RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 EGLN3Q9H6Z9 239 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 POLD4Q9HCU8 107 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 ZNF701Q9NV72 531 aaPredicted RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 SLC38A7Q9NVC3 462 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 CLN8Q9UBY8 286 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 MRM2Q9UI43 246 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 MUTYHQ9UIF7 546 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 MRTO4Q9UKD2 239 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 URGCP-MRPS24S4R325 110 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 PRRC2BQ5JSZ5 2229 aaKnown RBP4.07□□□□□ -1.76
CD44-202ENST00000278385 MICAL3Q7RTP6 2002 aa4.07□□□□□ -1.76
CD44-202ENST00000278385 SMIM28A0A1B0GU29 152 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 LOC105371267A0A1B0GV96 52 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 TMEM213A2RRL7 107 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 VPS37CA5D8V6 355 aaPredicted RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 GOLGA6L4A6NEF3 574 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 YJEFN3A6XGL0 299 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 GOLGA6L19H0YKK7 550 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 SMLR1H3BR10 107 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 HSPB6O14558 160 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 RFXANKO14593 260 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 SIVA1O15304 175 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 SLC16A4O15374 487 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 EMC8O43402 210 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 CNOT3O75175 753 aaKnown RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 RBMXL2O75526 392 aaKnown RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 B3GAT3O94766 335 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 STK17BO94768 372 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 CLDN9O95484 217 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 EML2O95834 649 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 FADS2O95864 444 aaKnown RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 GAPDHP04406 335 aaKnown RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 IL6P05231 212 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 EDN1P05305 212 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 KRT7P08729 469 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 CD3GP09693 182 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 CTXN2P0C2S0 81 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 KCNE1P15382 129 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 MAGP20916 626 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 SYT1P21579 422 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 ACTR1BP42025 376 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 OR3A3P47888 321 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 TGM4P49221 684 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 DUSP3P51452 185 aaPredicted RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 PSMD7P51665 324 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 CEBPGP53567 150 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 ERVK-25P63136 954 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 UPP1Q16831 310 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 PTPN20Q4JDL3 420 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 XKR6Q5GH73 641 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 GPR107Q5VW38 600 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 RTL6Q6ICC9 239 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 DUS1LQ6P1R4 473 aaKnown RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 ULK3Q6PHR2 472 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 ALKAL1Q6UXT8 129 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 GCNT7Q6ZNI0 430 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 ZNF367Q7RTV3 350 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 ACOT1Q86TX2 421 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 RANBP3LQ86VV4 465 aaPredicted RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 TRIM69Q86WT6 500 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 UBALD2Q8IYN6 164 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 MCOLN2Q8IZK6 566 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 LIX1Q8N485 282 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 LRRC75AQ8NAA5 344 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 POC1AQ8NBT0 407 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 TMEM161BQ8NDZ6 487 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 PRSS3P2Q8NHM4 247 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 LNX1Q8TBB1 728 aaPredicted RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 PIH1D2Q8WWB5 315 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 FAM131CQ96AQ9 280 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 TMEM19Q96HH6 336 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 OPALINQ96PE5 141 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 CSPG4P5Q96PW8 444 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 AGPAT1Q99943 283 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 SH3GL3Q99963 347 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 POMKQ9H5K3 350 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 GKN1Q9NS71 199 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 STMN3Q9NZ72 180 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 PILRAQ9UKJ1 303 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 DIMT1Q9UNQ2 313 aaKnown RBP4.06□□□□□ -1.76
CD44-202ENST00000278385 KLHDC2Q9Y2U9 406 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 TIMM10BQ9Y5J6 103 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 DOCK5Q9H7D0 1870 aa4.06□□□□□ -1.76
CD44-202ENST00000278385 CDH23Q9H251 3354 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 PTPRSQ13332 1948 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 A0A1W2PNV4 684 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 PRSS37A4D1T9 235 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 SHISA7A6NL88 538 aa4.05□□□□□ -1.76
CD44-202ENST00000278385 ERI2A8K979 691 aaKnown RBP4.05□□□□□ -1.76
CD44-202ENST00000278385 B4DGG1 531 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms