RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 NEURL3Q96EH8 262 aa13.06□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ZNF354BQ96LW1 612 aa13.06□□□□□ -0.32
TNFRSF11A-201ENST00000269485 NIPAL2Q9H841 368 aa13.06□□□□□ -0.32
TNFRSF11A-201ENST00000269485 FBXL2Q9UKC9 423 aa13.06□□□□□ -0.32
TNFRSF11A-201ENST00000269485 CACNA1DQ01668 2161 aa13.06□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ABCA4P78363 2273 aa13.06□□□□□ -0.32
TNFRSF11A-201ENST00000269485 HYKKA2RU49 373 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SLC16A6O15403 523 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 LYRM1O43325 122 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 GPANK1O95872 356 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 STOMP27105 288 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PYCR1P32322 319 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PROX2Q3B8N5 592 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 OR56A1Q8NGH5 318 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 OR4C3Q8NH37 302 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 OR51Q1Q8NH59 317 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ENKD1Q9H0I2 346 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ASB4Q9Y574 426 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 DCHS1Q96JQ0 3298 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SEMA7AO75326 666 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 DRD5P21918 477 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 NDUFS1P28331 727 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PER3P56645 1201 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 POLR2GP62487 172 aaKnown RBP eCLIP13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ELOCQ15369 112 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PRAMEF20Q5VT98 475 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 LANCL3Q6ZV70 420 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 CCDC190Q86UF4 302 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 GPAT4Q86UL3 456 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 IZUMO1Q8IYV9 350 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 NDC1Q9BTX1 674 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ACTRT3Q9BYD9 372 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 C8orf33Q9H7E9 229 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 NCDNQ9UBB6 729 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 NDRG4Q9ULP0 352 aaKnown RBP13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PLXNB3Q9ULL4 1909 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 LINC00587B1AMM8 73 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SOX1O00570 391 aaPredicted RBP13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 GIPRP48546 466 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ST3GAL3Q11203 375 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 IDNKQ5T6J7 187 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 DNAJC22Q8N4W6 341 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 OR10Z1Q8NGY1 313 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SUN3Q8TAQ9 357 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 TNFRSF13CQ96RJ3 184 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 MICU1Q9BPX6 476 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 MENTQ9BUN1 341 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PCDH15Q96QU1 1955 aa13.05□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ZNHIT1O43257 154 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ANXA3P12429 323 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 CXCL12P48061 93 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ZNF91Q05481 1191 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 TP53I3Q53FA7 332 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 FCRL6Q6DN72 434 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SLC27A4Q6P1M0 643 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SLC16A13Q7RTY0 426 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 OR4C6Q8NH72 309 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 GPR119Q8TDV5 335 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 TTC9Q92623 222 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 NUDT15Q9NV35 164 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ZNF226Q9NYT6 803 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 A0A0J9YY10 115 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 RAB3AP20336 220 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 GGT2P36268 569 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ZCCHC12Q6PEW1 402 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 OR13C5Q8NGS8 318 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 OR2A5Q96R48 311 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 BARHL1Q9BZE3 327 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 ALKBH4Q9NXW9 302 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PADI2Q9Y2J8 665 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 AP1M2Q9Y6Q5 423 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SPTY2D1-AS1A0A0U1RR47 76 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 DAPL1A0PJW8 107 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 FAM221BA6H8Z2 402 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 STX11O75558 287 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 WNT1P04628 370 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 IL12BP29460 328 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 KCNJ5P48544 419 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 CTBP2P56545 445 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 CCINQ13939 588 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SPHARQ15513 63 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PGBD2Q6P3X8 592 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 TSEN54Q7Z6J9 526 aaKnown RBP13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 RANBP3LQ86VV4 465 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 MARCH9Q86YJ5 346 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 KLHL6Q8WZ60 621 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PHF3Q92576 2039 aaKnown RBP13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 GAL3ST3Q96A11 431 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 UPRTQ96BW1 309 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 PHF7Q9BWX1 381 aaPredicted RBP13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 TBL1XR1Q9BZK7 514 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 NIT2Q9NQR4 276 aa13.04□□□□□ -0.32
TNFRSF11A-201ENST00000269485 DRD2P14416 443 aa13.03□□□□□ -0.32
TNFRSF11A-201ENST00000269485 SDC2P34741 201 aa13.03□□□□□ -0.32
TNFRSF11A-201ENST00000269485 AKR1C2P52895 323 aa13.03□□□□□ -0.32
TNFRSF11A-201ENST00000269485 GBX2P52951 348 aaPredicted RBP13.03□□□□□ -0.32
TNFRSF11A-201ENST00000269485 AKR1C1Q04828 323 aa13.03□□□□□ -0.32
TNFRSF11A-201ENST00000269485 CARD17Q5XLA6 110 aa13.03□□□□□ -0.32
TNFRSF11A-201ENST00000269485 MFSD9Q8NBP5 474 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms