RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 INAQ16352 499 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 TCEAL6Q6IPX3 200 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 CD200R1LQ6Q8B3 271 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 LRRC75AQ8NAA5 344 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 SDR9C7Q8NEX9 313 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 OR8K3Q8NH51 312 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 ATOH1Q92858 354 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-201ENST00000269318 TCEAL3Q969E4 200 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 TMEM203Q969S6 136 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 KTI12Q96EK9 354 aaPredicted RBP15.14■□□□□ 0.01
CCDC40-201ENST00000269318 DEPDC7Q96QD5 511 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 NANSQ9NR45 359 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 INPP5EQ9NRR6 644 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 RXFP3Q9NSD7 469 aa15.14■□□□□ 0.01
CCDC40-201ENST00000269318 PNMA8CA0A1B0GUJ8 204 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 KHNYNO15037 678 aaKnown RBP15.13■□□□□ 0.01
CCDC40-201ENST00000269318 AKAP8O43823 692 aaKnown RBP15.13■□□□□ 0.01
CCDC40-201ENST00000269318 GMFGO60234 142 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 CDC40O60508 579 aaKnown RBP eCLIP15.13■□□□□ 0.01
CCDC40-201ENST00000269318 WISP1O95388 367 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 GYPBP06028 91 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 PGCP20142 388 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 ITPKBP27987 946 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 RPS19P39019 145 aaKnown RBP15.13■□□□□ 0.01
CCDC40-201ENST00000269318 P2RX1P51575 399 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 EFR3AQ14156 821 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 DBX2Q6ZNG2 339 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 ZFP41Q8N8Y5 198 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 FAM98AQ8NCA5 519 aaKnown RBP15.13■□□□□ 0.01
CCDC40-201ENST00000269318 NPEPL1Q8NDH3 523 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 ALG8Q9BVK2 526 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 WDR54Q9H977 334 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 ISG20L2Q9H9L3 353 aaKnown RBP15.13■□□□□ 0.01
CCDC40-201ENST00000269318 TRBV11-1A0A0K0K1C0 115 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 IDH3BO43837 385 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 ZNF883P0CG24 379 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 CCL4P13236 92 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 UQCRC1P31930 480 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 SOX6P35712 828 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 MPLP40238 635 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 AQP2P41181 271 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 SLC16A1P53985 500 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 SLC26A5P58743 744 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 MC2RQ01718 297 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 BDH1Q02338 343 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 CBFBQ13951 182 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 GALEQ14376 348 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 VASNQ6EMK4 673 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 C8orf44Q96CB5 159 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 TM9SF2Q99805 663 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 KATNB1Q9BVA0 655 aa15.13■□□□□ 0.01
CCDC40-201ENST00000269318 C6orf62Q9GZU0 229 aaPredicted RBP15.13■□□□□ 0.01
CCDC40-201ENST00000269318 GP1BAP07359 652 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 MRPL3P09001 348 aaKnown RBP15.12■□□□□ 0.01
CCDC40-201ENST00000269318 ACP1P24666 158 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 FBXW4P57775 412 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 ERVK-25P63136 954 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 TMPRSS11AQ6ZMR5 421 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 FAM122BQ7Z309 247 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 C10orf53Q8N6V4 93 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 OR10H4Q8NGA5 316 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 GPR119Q8TDV5 335 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 THAP3Q8WTV1 239 aaPredicted RBP15.12■□□□□ 0.01
CCDC40-201ENST00000269318 RNF138Q8WVD3 245 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 HGDQ93099 445 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 TAAR8Q969N4 342 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 PMEPA1Q969W9 287 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 TBX5Q99593 518 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 BARHL1Q9BZE3 327 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 NMNAT2Q9BZQ4 307 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 KLHL1Q9NR64 748 aa15.12■□□□□ 0.01
CCDC40-201ENST00000269318 DAPL1A0PJW8 107 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 BLOC1S5-TXNDC5H3BN57 136 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 SLC30A4O14863 429 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 GP1BBP13224 206 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 APEHP13798 732 aaKnown RBP15.11■□□□□ 0.01
CCDC40-201ENST00000269318 FGF9P31371 208 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-201ENST00000269318 FABP5Q01469 135 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 ZNF85Q03923 595 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 POU4F2Q12837 409 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 GGTLC2Q14390 218 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 QPRTQ15274 297 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 C22orf42Q6IC83 251 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 KLBQ86Z14 1044 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 MISPQ8IVT2 679 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 ARIH2OSQ8N7S6 290 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 B4GALNT2Q8NHY0 566 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 ZPLD1Q8TCW7 415 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 DUSP19Q8WTR2 217 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 SMPDL3BQ92485 455 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 RASD2Q96D21 266 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 C1GALT1C1Q96EU7 318 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 NMNAT3Q96T66 252 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 ARRDC1-AS1Q9H2J1 176 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 TOR4AQ9NXH8 423 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 BABAM2Q9NXR7 383 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 C19orf25Q9UFG5 118 aaPredicted RBP15.11■□□□□ 0.01
CCDC40-201ENST00000269318 ZNF229Q9UJW7 825 aa15.11■□□□□ 0.01
CCDC40-201ENST00000269318 NXT1Q9UKK6 140 aaKnown RBP15.11■□□□□ 0.01
CCDC40-201ENST00000269318 EXPH5Q8NEV8 1989 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms