RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 ZNF808Q8N4W9 903 aaPredicted RBP11.4□□□□□ -0.58
SS18-202ENST00000269138 STK35Q8TDR2 534 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 TAAR8Q969N4 342 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 CPNE4Q96A23 557 aaPredicted RBP11.4□□□□□ -0.58
SS18-202ENST00000269138 PYURFQ96I23 114 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 C7orf34Q96L11 122 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 PRSS27Q9BQR3 290 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 PTDSS2Q9BVG9 487 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 UCK2Q9BZX2 261 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 RNF122Q9H9V4 155 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 RHCGQ9UBD6 479 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 TRAPPC4Q9Y296 219 aa11.4□□□□□ -0.58
SS18-202ENST00000269138 TCRBV5S2A0A599 114 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 LIPT2A6NK58 231 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 HSPB2A8KAH6 182 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 SMAD9O15198 467 aaKnown RBP11.4□□□□□ -0.59
SS18-202ENST00000269138 RAMP1O60894 148 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 OR5F1O95221 314 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 SEMG1P04279 462 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 CTSSP25774 331 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 IDUAP35475 653 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 RPS5P46782 204 aaKnown RBP11.4□□□□□ -0.59
SS18-202ENST00000269138 CSNK2A1P68400 391 aaPredicted RBP11.4□□□□□ -0.59
SS18-202ENST00000269138 VLDLRP98155 873 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 OR7A5Q15622 319 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 HSPB2Q16082 182 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 SWT1Q5T5J6 900 aaKnown RBP11.4□□□□□ -0.59
SS18-202ENST00000269138 LCN8Q6JVE9 175 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 CCDC121Q6ZUS5 278 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 FCRLAQ7L513 359 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 NKAIN4Q8IVV8 208 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 CCDC103Q8IW40 242 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 ABHD3Q8WU67 409 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 COQ3Q9NZJ6 369 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 ENPP4Q9Y6X5 453 aa11.4□□□□□ -0.59
SS18-202ENST00000269138 NCOA6Q14686 2063 aaPredicted RBP11.39□□□□□ -0.59
SS18-202ENST00000269138 LRRK2Q5S007 2527 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 A0A1W2PNV4 684 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 hCG_2039718K7EN88 272 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 EBAG9O00559 213 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 DIRAS1O95057 198 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 AKR7A3O95154 331 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 AHSA1O95433 338 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 FCGR2AP12318 317 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 BMP5P22003 454 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 CBLP22681 906 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 CHRNB4P30926 498 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 KIR2DL2P43627 348 aaPredicted RBP11.39□□□□□ -0.59
SS18-202ENST00000269138 RASSF2P50749 326 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 SIRPAP78324 504 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 SLC35A1P78382 337 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 LTBQ06643 244 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 IQCCQ4KMZ1 466 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 XKRXQ6PP77 449 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 RELL2Q8NC24 303 aaPredicted RBP11.39□□□□□ -0.59
SS18-202ENST00000269138 LILRB4Q8NHJ6 448 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 RNF128Q8TEB7 428 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 ASB5Q8WWX0 329 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 SLC25A36Q96CQ1 311 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 ASB9Q96DX5 294 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 PRRC1Q96M27 445 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 LRMDAQ9H2I8 198 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 MUC13Q9H3R2 512 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 NDUFAF4Q9P032 175 aa11.39□□□□□ -0.59
SS18-202ENST00000269138 ING1Q9UK53 422 aaPredicted RBP11.39□□□□□ -0.59
SS18-202ENST00000269138 ARHGAP21Q5T5U3 1957 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 TRAV36DV7A0A075B6V5 113 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 A1L4Q6 167 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 NKX2-6A6NCS4 301 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 FAM90A27PA6NNH2 459 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 FTCDNL1E5RQL4 147 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 LRRN3E7EW58 273 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 KPNA4O00629 521 aaPredicted RBP11.38□□□□□ -0.59
SS18-202ENST00000269138 TNFSF13O75888 250 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 PRSS23O95084 383 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 GPIP06744 558 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 AGAP20933 346 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 LSM11P83369 360 aaKnown RBP eCLIP11.38□□□□□ -0.59
SS18-202ENST00000269138 H3F3AP84243 136 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 TRAP1Q12931 704 aaKnown RBP11.38□□□□□ -0.59
SS18-202ENST00000269138 GUSBP1Q15486 140 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 OR2A2Q6IF42 318 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 VWA1Q6PCB0 445 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 TMEM99Q8N816 258 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 CNEP1R1Q8N9A8 125 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 MFSD8Q8NHS3 518 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 CA5BP1Q8WTZ4 195 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 TMEM255BQ8WV15 326 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 MCUR1Q96AQ8 359 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 ZNF775Q96BV0 537 aaPredicted RBP11.38□□□□□ -0.59
SS18-202ENST00000269138 MPP4Q96JB8 637 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 ZFP3Q96NJ6 502 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 SEPHS2Q99611 448 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 TMEM43Q9BTV4 400 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 ZNF426Q9BUY5 554 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 FNDC11Q9BVV2 318 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 POLR2J2Q9GZM3 115 aaKnown RBP11.38□□□□□ -0.59
SS18-202ENST00000269138 POLR2J3Q9H1A7 115 aaKnown RBP11.38□□□□□ -0.59
SS18-202ENST00000269138 MAN2C1Q9NTJ4 1040 aa11.38□□□□□ -0.59
SS18-202ENST00000269138 KLHL13Q9P2N7 655 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms