RNA–Protein interactions for RNA: ENST00000265745.13

VPS41-201, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 2

Gene VPS41, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-201ENST00000265745 SLC16A1P53985 500 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 OR2B6P58173 313 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 MAGOHP61326 146 aaKnown RBP8.58□□□□□ -1.04
VPS41-201ENST00000265745 RPS4XP62701 263 aaKnown RBP8.58□□□□□ -1.04
VPS41-201ENST00000265745 BSPH1Q075Z2 132 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 GNA13Q14344 377 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 PPA1Q15181 289 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 STK11Q15831 433 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 PGGHGQ32M88 737 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 SLC9B1Q4ZJI4 515 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 PDCD4Q53EL6 469 aaKnown RBP8.58□□□□□ -1.04
VPS41-201ENST00000265745 ATG16L1Q676U5 607 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 SSX8Q7RTT4 187 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 MAVSQ7Z434 540 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 ZNF433Q8N7K0 673 aaPredicted RBP8.58□□□□□ -1.04
VPS41-201ENST00000265745 PIGXQ8TBF5 258 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 PNPT1Q8TCS8 783 aaKnown RBP8.58□□□□□ -1.04
VPS41-201ENST00000265745 MGARPQ8TDB4 240 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 SMAP2Q8WU79 429 aaPredicted RBP8.58□□□□□ -1.04
VPS41-201ENST00000265745 NEUROG1Q92886 237 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 FBXW5Q969U6 566 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 MUCL1Q96DR8 90 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 DNAJA3Q96EY1 480 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 ADAM19Q9H013 955 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 MANSC1Q9H8J5 431 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 SDR39U1Q9NRG7 319 aaPredicted RBP8.58□□□□□ -1.04
VPS41-201ENST00000265745 RLIMQ9NVW2 624 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 PRDM4Q9UKN5 801 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 NOSIPQ9Y314 301 aaKnown RBP8.58□□□□□ -1.04
VPS41-201ENST00000265745 TMED7Q9Y3B3 224 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 JMJD1CQ15652 2540 aa8.58□□□□□ -1.04
VPS41-201ENST00000265745 TMEM72A0PK05 275 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 CDHR4A6H8M9 788 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 SHISA9B4DS77 424 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 EIF1BO60739 113 aaKnown RBP8.57□□□□□ -1.04
VPS41-201ENST00000265745 MRPL33O75394 65 aaKnown RBP8.57□□□□□ -1.04
VPS41-201ENST00000265745 TFPTP0C1Z6 253 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 ZCCHC18P0CG32 403 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 IMPDH2P12268 514 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 ACAA2P42765 397 aaKnown RBP8.57□□□□□ -1.04
VPS41-201ENST00000265745 SLC35A1P78382 337 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 GSTA3Q16772 222 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 MRPL2Q5T653 305 aaKnown RBP8.57□□□□□ -1.04
VPS41-201ENST00000265745 NXNQ6DKJ4 435 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 LSRQ86X29 649 aaPredicted RBP8.57□□□□□ -1.04
VPS41-201ENST00000265745 PEX5LQ8IYB4 626 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 UBE2J2Q8N2K1 259 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 KBTBD8Q8NFY9 601 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 SLC38A5Q8WUX1 472 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 APH1AQ96BI3 265 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 TLCD1Q96CP7 247 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 DDIT4LQ96D03 193 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 MUS81Q96NY9 551 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 OR52B2Q96RD2 323 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 TPT1P8Q9HAU6 139 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 TMBIM4Q9HC24 238 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 ASB6Q9NWX5 421 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 NKIRAS1Q9NYS0 192 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 NPAP1Q9NZP6 1156 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 ZIM2Q9NZV7 527 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 MALT1Q9UDY8 824 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 TLN2Q9Y4G6 2542 aa8.57□□□□□ -1.04
VPS41-201ENST00000265745 HIVEP2P31629 2446 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 DSPPQ9NZW4 1301 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 A0A096LPE4 126 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 A0A1W2PPZ6 126 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 CIB4A0PJX0 185 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 ZC3H12DA2A288 527 aaKnown RBP8.56□□□□□ -1.04
VPS41-201ENST00000265745 CCT8L1PA6NM43 557 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 PDLIM1O00151 329 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 KLF11O14901 512 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 UBDO15205 165 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 RAD51DO75771 328 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 CD8AP01732 235 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 ETFAP13804 333 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 UQCRBP14927 111 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 CRATP43155 626 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 EPS8Q12929 822 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 TNK1Q13470 666 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 SLC17A1Q14916 467 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 ETFDHQ16134 617 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 BEND6Q5SZJ8 279 aaPredicted RBP8.56□□□□□ -1.04
VPS41-201ENST00000265745 MSANTD1Q6ZTZ1 278 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 VRK2Q86Y07 508 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 ZNF440Q8IYI8 595 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 CLIP4Q8N3C7 705 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 WDR60Q8WVS4 1066 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 VPS33AQ96AX1 596 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 TRMT61AQ96FX7 289 aaKnown RBP8.56□□□□□ -1.04
VPS41-201ENST00000265745 ITCHQ96J02 903 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 RADILQ96JH8 1075 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 NAA11Q9BSU3 229 aaPredicted RBP8.56□□□□□ -1.04
VPS41-201ENST00000265745 RMND5AQ9H871 391 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 PARPBPQ9NWS1 579 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 TAS2R16Q9NYV7 291 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 CISD1Q9NZ45 108 aaKnown RBP8.56□□□□□ -1.04
VPS41-201ENST00000265745 P2RX2Q9UBL9 471 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 CHST2Q9Y4C5 530 aa8.56□□□□□ -1.04
VPS41-201ENST00000265745 MAGED1Q9Y5V3 778 aaPredicted RBP8.56□□□□□ -1.04
VPS41-201ENST00000265745 SLC25A15Q9Y619 301 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms