RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 MC2RQ01718 297 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 PRDX1Q06830 199 aaKnown RBP11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 CBFBQ13951 182 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 AMZ1Q400G9 498 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 ABHD17CQ6PCB6 329 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 TSSK4Q6SA08 328 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 ATRAIDQ6UW56 229 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 UQCC3Q6UW78 93 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 GLB1L2Q8IW92 636 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 SAMD14Q8IZD0 417 aaPredicted RBP11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 ZNF433Q8N7K0 673 aaPredicted RBP11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 PFN4Q8NHR9 129 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 TNFAIP8L1Q8WVP5 186 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 MIB2Q96AX9 1013 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 MRGPRX3Q96LB0 322 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 SMAD5Q99717 465 aaKnown RBP11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 EXOSC3Q9NQT5 275 aaKnown RBP11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 MLXQ9UH92 298 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 MTCL1Q9Y4B5 1905 aaKnown RBP11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 A0A1W2PPV9 198 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 PYCARD-AS1I3L0S3 204 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 GOSR2O14653 212 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 PCDH8O95206 1070 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 ZIC2O95409 532 aaPredicted RBP11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 CSF1P09603 554 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 H2AFB1P0C5Y9 115 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 PSMB5P28074 263 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 SCAND1P57086 179 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 DUSP2Q05923 314 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 SPOUT1Q5T280 376 aaKnown RBP11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 PWWP2BQ6NUJ5 590 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 MFSD12Q6NUT3 480 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 LRRN1Q6UXK5 716 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 THSD4Q6ZMP0 1018 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 SSX6Q7RTT6 188 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 SLC35F2Q8IXU6 374 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 OR13C2Q8NGS9 318 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 OR10K1Q8NGX5 313 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 CYB5D2Q8WUJ1 264 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 MS4A6EQ96DS6 147 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 GIMAP5Q96F15 307 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 PEX11GQ96HA9 241 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 PRDM7Q9NQW5 492 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 GNG8Q9UK08 70 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 ZNF281Q9Y2X9 895 aa11.42□□□□□ -0.58
CHMP2B-201ENST00000263780 RFPL4AA6NLU0 287 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 RFPL4AL1F8VTS6 287 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 K7ESM1 405 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 PPM1DO15297 605 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 RASGRP1O95267 797 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 LRG1P02750 347 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 PRNPP04156 253 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 RLN1P04808 185 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 EPCAMP16422 314 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 MPGP29372 298 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 DCTDP32321 178 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 TAS2R20P59543 309 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 GGTLC2Q14390 218 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 C11orf88Q6PI97 169 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 DNM1P46Q6ZS02 220 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 NRROSQ86YC3 692 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 SERPINA12Q8IW75 414 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 OR2L5Q8NG80 312 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 OR5M1Q8NGP8 315 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 OR1F2PQ96R84 312 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 PRSS16Q9NQE7 514 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 C20orf141Q9NUB4 165 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 RASL12Q9NYN1 266 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 SPDEFO95238 335 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 PPP1R3DO95685 299 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 VSIG10L2P0DP72 767 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 CLUP10909 449 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 CDK2P24941 298 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 H2BFSP57053 126 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 CYB561A3Q8NBI2 242 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 OR6N1Q8NGY5 312 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 CCDC107Q8WV48 283 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 HMGB4Q8WW32 186 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 CDS1Q92903 461 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 GCDHQ92947 438 aaPredicted RBP11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 ARMC5Q96C12 935 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 ZNF681Q96N22 645 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 SLC46A2Q9BY10 475 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 PIGMQ9H3S5 423 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 KLHL31Q9H511 634 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 TMEM27Q9HBJ8 222 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 TMEM138Q9NPI0 162 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 SPHK2Q9NRA0 654 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 ACTR10Q9NZ32 417 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 UPB1Q9UBR1 384 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 SERTAD3Q9UJW9 196 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 COL4A3Q01955 1670 aa11.41□□□□□ -0.58
CHMP2B-201ENST00000263780 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 A0A1W2PRU2 124 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 CTNSO60931 367 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 CBX7O95931 251 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 SLC35G4P0C7Q5 338 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 FUT1P19526 365 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 ST8SIA6P61647 398 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms