RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 CLDN2P57739 230 aa13.82□□□□□ -0.2
XRCC1-201ENST00000262887 CRMP1Q14194 572 aa13.82□□□□□ -0.2
XRCC1-201ENST00000262887 CDK5R1Q15078 307 aa13.82□□□□□ -0.2
XRCC1-201ENST00000262887 TCEAL4Q96EI5 215 aa13.82□□□□□ -0.2
XRCC1-201ENST00000262887 NARS2Q96I59 477 aaKnown RBP13.82□□□□□ -0.2
XRCC1-201ENST00000262887 TINAGL1Q9GZM7 467 aaPredicted RBP13.82□□□□□ -0.2
XRCC1-201ENST00000262887 EDARQ9UNE0 448 aa13.82□□□□□ -0.2
XRCC1-201ENST00000262887 CHD7Q9P2D1 2997 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 VCANP13611 3396 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 SYNDIG1LA6NDD5 238 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 KPNA3O00505 521 aaPredicted RBP13.81□□□□□ -0.2
XRCC1-201ENST00000262887 PTHLHP12272 177 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 RPA2P15927 270 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 FLT3LGP49771 235 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 P2RX1P51575 399 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 TMEM69Q5SWH9 247 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 DENND4CQ5VZ89 1909 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 ADIPOR2Q86V24 386 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 CAMKVQ8NCB2 501 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 OR9A2Q8NGT5 310 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 C1orf216Q8TAB5 229 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 S100A16Q96FQ6 103 aaKnown RBP13.81□□□□□ -0.2
XRCC1-201ENST00000262887 ATG4BQ9Y4P1 393 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 REV3LO60673 3130 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 MYOFQ9NZM1 2061 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 A0A1W2PR48 441 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 RCBTB2O95199 551 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 DPP4P27487 766 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 ARFIP1P53367 373 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 HCCSP53701 268 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 RPS11P62280 158 aaKnown RBP eCLIP13.81□□□□□ -0.2
XRCC1-201ENST00000262887 MRPS10P82664 201 aaKnown RBP13.81□□□□□ -0.2
XRCC1-201ENST00000262887 ZNF433Q8N7K0 673 aaPredicted RBP13.81□□□□□ -0.2
XRCC1-201ENST00000262887 OR2AK2Q8NG84 335 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 OR4C6Q8NH72 309 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 ADAMTS15Q8TE58 950 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 PELI1Q96FA3 418 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 ZNF514Q96K75 400 aaPredicted RBP13.81□□□□□ -0.2
XRCC1-201ENST00000262887 LINC00615Q96LM1 132 aaPredicted RBP13.81□□□□□ -0.2
XRCC1-201ENST00000262887 MACROD1Q9BQ69 325 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 PRSS27Q9BQR3 290 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 SEMA4CQ9C0C4 833 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 KLHL31Q9H511 634 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 FOXJ3Q9UPW0 622 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 SLC35A3Q9Y2D2 325 aa13.81□□□□□ -0.2
XRCC1-201ENST00000262887 TRBV2A0A0J9YWF9 115 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 LRIT2A6NDA9 550 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 IFITM5A6NNB3 132 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 ZNF879B4DU55 563 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 GNB5O14775 395 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 ZNF3P17036 446 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 SRMP19623 302 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 CSNK2A2P19784 350 aaPredicted RBP13.8□□□□□ -0.2
XRCC1-201ENST00000262887 CSRP2Q16527 193 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 DCAF12L2Q5VW00 463 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 TMEM215Q68D42 235 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 ELP2Q6IA86 826 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 WDR88Q6ZMY6 472 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 PARS2Q7L3T8 475 aaKnown RBP13.8□□□□□ -0.2
XRCC1-201ENST00000262887 SLC36A1Q7Z2H8 476 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 OR13C2Q8NGS9 318 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 TMEM239Q8WW34 195 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 PDCD1LG2Q9BQ51 273 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 AICDAQ9GZX7 198 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 BIN3Q9NQY0 253 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 DTX4Q9Y2E6 619 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 KIAA1549LQ6ZVL6 1849 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 A0A1W2PRU2 124 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 ACOT7O00154 380 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 SOD2P04179 222 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 UBBP0CG47 229 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 UBCP0CG48 685 aaKnown RBP13.8□□□□□ -0.2
XRCC1-201ENST00000262887 ERGP11308 486 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 SELPP16109 830 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 SLC2A5P22732 501 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 MPIP34949 423 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 CD96P40200 585 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 FNTBP49356 437 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 CLDN12P56749 244 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 UBE2MP61081 183 aaKnown RBP13.8□□□□□ -0.2
XRCC1-201ENST00000262887 RPS27AP62979 156 aaKnown RBP13.8□□□□□ -0.2
XRCC1-201ENST00000262887 UBA52P62987 128 aaKnown RBP13.8□□□□□ -0.2
XRCC1-201ENST00000262887 FGL2Q14314 439 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 HFEQ30201 348 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 ZNF836Q6ZNA1 936 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 FRRS1Q6ZNA5 592 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 TCEAL8Q8IYN2 117 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 SYNPRQ8TBG9 265 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 CXorf40AQ8TE69 158 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 SLC25A18Q9H1K4 315 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 NOX4Q9NPH5 578 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 CLDND1Q9NY35 253 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 RASL12Q9NYN1 266 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 ZNF223Q9UK11 482 aaPredicted RBP13.8□□□□□ -0.2
XRCC1-201ENST00000262887 ERVK-19Q9WJR5 959 aa13.8□□□□□ -0.2
XRCC1-201ENST00000262887 CLEC3AO75596 197 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 RASGRP1O95267 797 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 AIFM1O95831 613 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 RLN1P04808 185 aa13.79□□□□□ -0.2
XRCC1-201ENST00000262887 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms