RNA–Protein interactions for RNA: ENST00000262640.11

VAMP7-201, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 1 (best) BASIC

Gene VAMP7, Length 2,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-201ENST00000262640 ERVK-18Q9QC07 812 aa11.79□□□□□ -0.52
VAMP7-201ENST00000262640 CNOT1A5YKK6 2376 aaKnown RBP11.78□□□□□ -0.52
VAMP7-201ENST00000262640 EFCAB10A6NFE3 127 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ZNF208O43345 1280 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 AHSA1O95433 338 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 BGLAPP02818 100 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ASAH2BP0C7U1 165 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 EIF1P41567 113 aaKnown RBP11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ALDH3B2P48448 385 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 OC90Q02509 493 aaPredicted RBP11.78□□□□□ -0.52
VAMP7-201ENST00000262640 TMEM44Q2T9K0 475 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 TBC1D25Q3MII6 688 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 SYT14P1Q58G82 188 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 FAM69AQ5T7M9 428 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 KCTD8Q6ZWB6 473 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 AHSA2Q719I0 299 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 SPARTQ8N0X7 666 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 PSD4Q8NDX1 1056 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 OR1J4Q8NGS1 313 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 OR6S1Q8NH40 331 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 GGHQ92820 318 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ZBTB8AQ96BR9 441 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 COPS4Q9BT78 406 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 TIMMDC1Q9NPL8 285 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 CNOT2Q9NZN8 540 aaKnown RBP11.78□□□□□ -0.52
VAMP7-201ENST00000262640 HIF3AQ9Y2N7 669 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ZC3H12DA2A288 527 aaKnown RBP11.78□□□□□ -0.52
VAMP7-201ENST00000262640 DCDC2BA2VCK2 349 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 TRABD2BA6NFA1 517 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 SNTNA6NMZ2 147 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 HIST1H2ABP04908 130 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ADH6P28332 368 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 MLLT10P55197 1068 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 FOXK2Q01167 660 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 LTBQ06643 244 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 PIGFQ07326 219 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 NADK2Q4G0N4 442 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ATP1A1-AS1Q5TC04 95 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 TIGD3Q6B0B8 471 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ARHGAP11AQ6P4F7 1023 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 DPY19L2P2Q6ZN68 376 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 HIST3H2AQ7L7L0 130 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 PRSS48Q7RTY5 328 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 MAMDC2Q7Z304 686 aaPredicted RBP11.78□□□□□ -0.52
VAMP7-201ENST00000262640 NANOGNBQ7Z5D8 188 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 GALNT16Q8N428 558 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 HIST1H2ACQ93077 130 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 DDIT4LQ96D03 193 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ZNF582Q96NG8 517 aaPredicted RBP11.78□□□□□ -0.52
VAMP7-201ENST00000262640 UTP23Q9BRU9 249 aaKnown RBP11.78□□□□□ -0.52
VAMP7-201ENST00000262640 RHNO1Q9BSD3 238 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 PTDSS2Q9BVG9 487 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 CCDC90BQ9GZT6 254 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 FN3KQ9H479 309 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 AMBNQ9NP70 447 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 CMC2Q9NRP2 79 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 SERINC1Q9NRX5 453 aa11.78□□□□□ -0.52
VAMP7-201ENST00000262640 RPL36Q9Y3U8 105 aaKnown RBP11.78□□□□□ -0.52
VAMP7-201ENST00000262640 ARGFXA6NJG6 315 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 KDM4EB2RXH2 506 aaPredicted RBP11.77□□□□□ -0.53
VAMP7-201ENST00000262640 OR2T1O43869 369 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 TRIM3O75382 744 aaPredicted RBP11.77□□□□□ -0.53
VAMP7-201ENST00000262640 PPP1R3DO95685 299 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 PIPP12273 146 aaPredicted RBP11.77□□□□□ -0.53
VAMP7-201ENST00000262640 PEPDP12955 493 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 RPL4P36578 427 aaKnown RBP11.77□□□□□ -0.53
VAMP7-201ENST00000262640 SOX8P57073 446 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 CLN3Q13286 438 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 SATL1Q86VE3 508 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 ZNF227Q86WZ6 799 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 SVOPQ8N4V2 548 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 POC1BQ8TC44 478 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 SIGLEC11Q96RL6 698 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 GPX7Q96SL4 187 aaPredicted RBP11.77□□□□□ -0.53
VAMP7-201ENST00000262640 NPAS1Q99742 590 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 GPR83Q9NYM4 423 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 LRFN1Q9P244 771 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 GPR52Q9Y2T5 361 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 PCDHGB1Q9Y5G3 927 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 SPIN1Q9Y657 262 aaPredicted RBP11.77□□□□□ -0.53
VAMP7-201ENST00000262640 RIIAD1A6NNX1 92 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 G3V3Y1 287 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 PRODHO43272 600 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 CBR3O75828 277 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 TSPAN19P0C672 248 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 JUNBP17275 347 aaPredicted RBP11.77□□□□□ -0.53
VAMP7-201ENST00000262640 HK1P19367 917 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 UQCRC1P31930 480 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 CD96P40200 585 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 SLC15A1P46059 708 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 DSCR4P56555 118 aaPredicted RBP11.77□□□□□ -0.53
VAMP7-201ENST00000262640 TUBA3CQ13748 450 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.77□□□□□ -0.53
VAMP7-201ENST00000262640 C1QL3Q5VWW1 255 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 TUBA3EQ6PEY2 450 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 ANKK1Q8NFD2 765 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 OR11A1Q9GZK7 315 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 FAM192AQ9GZU8 254 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 NDUFA13Q9P0J0 144 aa11.77□□□□□ -0.53
VAMP7-201ENST00000262640 SLC6A5Q9Y345 797 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms