RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 TOP3AQ13472 1001 aaPredicted RBP12.03□□□□□ -0.48
SGCA-201ENST00000262018 POU4F3Q15319 338 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 C1orf185Q5T7R7 199 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 ZNF691Q5VV52 312 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 TTC33Q6PID6 262 aaPredicted RBP12.03□□□□□ -0.48
SGCA-201ENST00000262018 THAP5Q7Z6K1 395 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 TSPYL5Q86VY4 417 aaPredicted RBP12.03□□□□□ -0.48
SGCA-201ENST00000262018 C8orf59Q8N0T1 100 aaPredicted RBP12.03□□□□□ -0.48
SGCA-201ENST00000262018 LINC00471Q8N535 108 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 ZNF321PQ8N8H1 164 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 TSPAN14Q8NG11 270 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 OR4N2Q8NGD1 307 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 OR9Q2Q8NGE9 314 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 DIO2Q92813 273 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 RNASE6Q93091 150 aaKnown RBP12.03□□□□□ -0.48
SGCA-201ENST00000262018 PITX2Q99697 317 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 G6PC3Q9BUM1 346 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 POLR2J2Q9GZM3 115 aaKnown RBP12.03□□□□□ -0.48
SGCA-201ENST00000262018 POLR2J3Q9H1A7 115 aaKnown RBP12.03□□□□□ -0.48
SGCA-201ENST00000262018 ANKRD19PQ9H560 264 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 MAN2C1Q9NTJ4 1040 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 ALKBH4Q9NXW9 302 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 ENOPH1Q9UHY7 261 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 COMMD3-BMI1R4GMX3 469 aa12.03□□□□□ -0.48
SGCA-201ENST00000262018 ARID1AO14497 2285 aa12.02□□□□□ -0.48
SGCA-201ENST00000262018 CHD3Q12873 2000 aaKnown RBP12.02□□□□□ -0.48
SGCA-201ENST00000262018 SONP18583 2426 aaKnown RBP12.02□□□□□ -0.49
SGCA-201ENST00000262018 NPIPA5A0A0B4J1W7 369 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 TRBV11-1A0A0K0K1C0 115 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 SH3PXD2BA1X283 911 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 CDHR4A6H8M9 788 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 TUBAL3A6NHL2 446 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 TRIM64CA6NLI5 447 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 CLDN24A6NM45 220 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 CLCA1A8K7I4 914 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 FAM47E-STBD1D6RA91 191 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 NPIPA7E9PJI5 369 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 NPIPB9F8W1W9 429 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 AP3D1O14617 1153 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 ADAP00813 363 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 NPIPA8P0DM63 369 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 DRD5P21918 477 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 RYKP34925 604 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 ASCL1P50553 236 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 ZNF136P52737 540 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 PSMD4P55036 377 aaKnown RBP12.02□□□□□ -0.49
SGCA-201ENST00000262018 ESRRGP62508 458 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 SEC23BQ15437 767 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 ZNF141Q15928 474 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.02□□□□□ -0.49
SGCA-201ENST00000262018 ZSWIM7Q19AV6 140 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 FGD3Q5JSP0 725 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 MRPL2Q5T653 305 aaKnown RBP12.02□□□□□ -0.49
SGCA-201ENST00000262018 RIPPLY2Q5TAB7 128 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 HSDL2Q6YN16 418 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 MDGA2Q7Z553 956 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 CYP4Z2PQ8N1L4 340 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 PARP8Q8N3A8 854 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 RELL2Q8NC24 303 aaPredicted RBP12.02□□□□□ -0.49
SGCA-201ENST00000262018 SETD9Q8NE22 299 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 OR8K3Q8NH51 312 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 FBLIM1Q8WUP2 373 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 TSC22D3Q99576 134 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 MCHR1Q99705 422 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 NIPSNAP1Q9BPW8 284 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 DEFB126Q9BYW3 111 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 ARMC7Q9H6L4 198 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 ZNF556Q9HAH1 456 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 VCX3AQ9NNX9 186 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 NDRG4Q9ULP0 352 aaKnown RBP12.02□□□□□ -0.49
SGCA-201ENST00000262018 MGAT4BQ9UQ53 548 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 LIPGQ9Y5X9 500 aa12.02□□□□□ -0.49
SGCA-201ENST00000262018 OR14I1A6ND48 311 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 FRG2CA6NGY1 282 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 OR6C76A6NM76 312 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 ACOT7O00154 380 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 WIPF1O43516 503 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 FRS3O43559 492 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 WDR1O75083 606 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 ZFAND5O76080 213 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 OR5F1O95221 314 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 GASTP01350 101 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 BMP7P18075 431 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 IFNA8P32881 189 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 ATP12AP54707 1039 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 TPD52P55327 224 aaPredicted RBP12.01□□□□□ -0.49
SGCA-201ENST00000262018 TAS2R41P59536 307 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 ST3GAL3Q11203 375 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 ENTPD8Q5MY95 495 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 RBM48Q5RL73 367 aaKnown RBP12.01□□□□□ -0.49
SGCA-201ENST00000262018 PODNL1Q6PEZ8 512 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 GRAMD2AQ8IUY3 354 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 LRRC75A-AS1Q8N1F1 130 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 ZNF786Q8N393 782 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 AQP11Q8NBQ7 271 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 LINC01560Q8TB33 94 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 SLC7A13Q8TCU3 470 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 OIT3Q8WWZ8 545 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 SLC35B4Q969S0 331 aa12.01□□□□□ -0.49
SGCA-201ENST00000262018 ADIPOR1Q96A54 375 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms