RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 CPNE4Q96A23 557 aaPredicted RBP13.34□□□□□ -0.27
CUX2-201ENST00000261726 SLC30A3Q99726 388 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 LMF2Q9BU23 707 aaKnown RBP13.34□□□□□ -0.27
CUX2-201ENST00000261726 IL26Q9NPH9 171 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 H7C1C5 153 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 SLC43A1O75387 559 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 OR10J4P0C629 311 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 DRD1P21728 446 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 PRKACBP22694 351 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 LCN6P62502 163 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 MAT1AQ00266 395 aaKnown RBP13.34□□□□□ -0.27
CUX2-201ENST00000261726 CCDC88AQ3V6T2 1871 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 NAA40Q86UY6 237 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 CHCHD4Q8N4Q1 142 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 ENPP5Q9UJA9 477 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 MYH2Q9UKX2 1941 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 GABRR3A8MPY1 467 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 A8MVM7 634 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 OR1D4P47884 311 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 C18orf63Q68DL7 685 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 GLB1L2Q8IW92 636 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 RLN3Q8WXF3 142 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 SLC19A3Q9BZV2 496 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 OPA3Q9H6K4 179 aa13.34□□□□□ -0.27
CUX2-201ENST00000261726 COL1A1P02452 1464 aaPredicted RBP13.34□□□□□ -0.27
CUX2-201ENST00000261726 MTCP1P56278 107 aa13.33□□□□□ -0.27
CUX2-201ENST00000261726 SIRPAP78324 504 aa13.33□□□□□ -0.27
CUX2-201ENST00000261726 LSAMPQ13449 338 aa13.33□□□□□ -0.27
CUX2-201ENST00000261726 RTL6Q6ICC9 239 aa13.33□□□□□ -0.27
CUX2-201ENST00000261726 FCRLAQ7L513 359 aa13.33□□□□□ -0.27
CUX2-201ENST00000261726 TCEAL8Q8IYN2 117 aa13.33□□□□□ -0.27
CUX2-201ENST00000261726 EID2Q8N6I1 236 aa13.33□□□□□ -0.27
CUX2-201ENST00000261726 OR2T27Q8NH04 317 aa13.33□□□□□ -0.27
CUX2-201ENST00000261726 BOKQ9UMX3 212 aaPredicted RBP13.33□□□□□ -0.27
CUX2-201ENST00000261726 AGAP14A8MT82 685 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 DEFA4P12838 97 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 SDC1P18827 310 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 RPS27AP62979 156 aaKnown RBP13.33□□□□□ -0.28
CUX2-201ENST00000261726 UBA52P62987 128 aaKnown RBP13.33□□□□□ -0.28
CUX2-201ENST00000261726 PRAMEF20Q5VT98 475 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 OVCH1Q7RTY7 1134 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 ZFP90Q8TF47 636 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 ZNF384Q8TF68 577 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 FN3KRPQ9HA64 309 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 CPNE5Q9HCH3 593 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 LRIT1Q9P2V4 623 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 RCE1Q9Y256 329 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 PRSS38A1L453 326 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 E7ESA3 106 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 G3V2L1 256 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 TOR1AO14656 332 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 GSTP1P09211 210 aaKnown RBP13.33□□□□□ -0.28
CUX2-201ENST00000261726 BMP2P12643 396 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 CBR1P16152 277 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 HNRNPFP52597 415 aaKnown RBP13.33□□□□□ -0.28
CUX2-201ENST00000261726 RAB40BQ12829 278 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 KIR2DS3Q14952 304 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 EBPQ15125 230 aaKnown RBP13.33□□□□□ -0.28
CUX2-201ENST00000261726 CPZQ66K79 652 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 TANGO2Q6ICL3 276 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 OR6T1Q8NGN1 323 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 FAM213BQ8TBF2 198 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 MED20Q9H944 212 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 CLDN1O95832 211 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 HLA-DOBP13765 273 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 CD68P34810 354 aaPredicted RBP13.33□□□□□ -0.28
CUX2-201ENST00000261726 TAS2R46P59540 309 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 MS4A2Q01362 244 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 SCCPDHQ8NBX0 429 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 CALHM2Q9HA72 323 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 PGAP2Q9UHJ9 254 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 SNED1Q8TER0 1413 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 GABARAPH6UMI1 98 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 SUSD5O60279 629 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 ZFAND5O76080 213 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 GABARAPO95166 117 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 GSK3AP49840 483 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 PLA2G7Q13093 441 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 ZNF74Q16587 644 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 ZNF705AQ6ZN79 300 aaPredicted RBP13.33□□□□□ -0.28
CUX2-201ENST00000261726 GPR26Q8NDV2 337 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 MDGA1Q8NFP4 955 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 OR5D18Q8NGL1 313 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 TMEM163Q8TC26 289 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 TSSK2Q96PF2 358 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 G3V3Y1 287 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 CATR1Q13166 79 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 ILKQ13418 452 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 TMEM176BQ3YBM2 270 aaPredicted RBP13.33□□□□□ -0.28
CUX2-201ENST00000261726 TMEFF1Q8IYR6 380 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 ADAMTS16Q8TE57 1224 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 ARNT2Q9HBZ2 717 aa13.33□□□□□ -0.28
CUX2-201ENST00000261726 ARHGEF15O94989 841 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 NFYAP23511 347 aaPredicted RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 SLC35D2Q76EJ3 337 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 PITHD1Q9GZP4 211 aaPredicted RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 ADAM19Q9H013 955 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 SRPK3Q9UPE1 567 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CA5BQ9Y2D0 317 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 LTBP4Q8N2S1 1624 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms