RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 FASLGP48023 281 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 NXPH1P58417 271 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 CFHR1Q03591 330 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 FAM27D1Q5T7N8 215 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 RDH10Q8IZV5 341 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 TSSK2Q96PF2 358 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 HDHD2Q9H0R4 259 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 IER3IP1Q9Y5U9 82 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 CACNA1HO95180 2353 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 POLR1CO15160 346 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 PRAMEF2O60811 474 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 S1PR1P21453 382 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 RPS5P46782 204 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 WNT4P56705 351 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 ERVK-25P63136 954 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 CD226Q15762 336 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 ODF4Q2M2E3 257 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 CNIH2Q6PI25 160 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 XKRXQ6PP77 449 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 GJD3Q8N144 294 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 OR4M1Q8NGD0 313 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 SHDQ96IW2 340 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 KATNB1Q9BVA0 655 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 B3GAT2Q9NPZ5 323 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 GVINP1Q7Z2Y8 2422 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 IGHV1OR21-1A0A087WYE8 117 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 CIB4A0PJX0 185 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 FAM86C2PA6NEL3 165 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 PATE3B3GLJ2 98 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 C11orf98E9PRG8 122 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 TEX46H3BTG2 121 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 NSA2O95478 260 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 PLGP00747 810 aaPredicted RBP13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 PRKACBP22694 351 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 STAT5AP42229 794 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 SLC1A3P43003 542 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 SIGIRRQ6IA17 410 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 TRIM63Q969Q1 353 aa13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 GTPBP2Q9BX10 602 aaKnown RBP13.44□□□□□ -0.26
TRAFD1-201ENST00000257604 LIMS3P0CW19 117 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 LIMS4P0CW20 117 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 AHCYP23526 432 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 SSTR2P30874 369 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 CSF2RBP32927 897 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 MAP2K3P46734 347 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 OR3A3P47888 321 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 FXYD6P3P58550 94 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 FOXK2Q01167 660 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 LCN1P1Q5VSP4 162 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 MARCH9Q86YJ5 346 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 LINC00471Q8N535 108 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 SLC37A3Q8NCC5 494 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 BEST4Q8NFU0 473 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 UPRTQ96BW1 309 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 VSTM2LQ96N03 204 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 IL20Q9NYY1 176 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 SLC23A1Q9UHI7 598 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 GMEB2Q9UKD1 530 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 MRPS7Q9Y2R9 242 aaKnown RBP13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 A0A087WV62 115 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 RIIAD1A6NNX1 92 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 ARHGEF9O43307 516 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 DUX1O43812 170 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 TOXO94900 526 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 NKX2-2O95096 273 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 ARFIP1P53367 373 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 PHF19Q5T6S3 580 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 MEDAGQ5VYS4 303 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 KRT74Q7RTS7 529 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 SYT9Q86SS6 491 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 ZNF595Q8IYB9 648 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 PROKR2Q8NFJ6 384 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 RFKQ969G6 155 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 CCDC74AQ96AQ1 378 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 CTHRC1Q96CG8 243 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 KCTD7Q96MP8 289 aa13.43□□□□□ -0.26
TRAFD1-201ENST00000257604 IQCMA0A1B0GVH7 501 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 ELOA3DA6NLF2 546 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 FCER2P06734 321 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 HSD11B2P80365 405 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 OCLNQ16625 522 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 ELOA3BQ3SY89 546 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 GUSBP11Q6P575 273 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 DEFB123Q8N688 67 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 CLDN22Q8N7P3 220 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 ELOA3Q8NG57 546 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 MAFAQ8NHW3 353 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 UFD1Q92890 307 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 RASD2Q96D21 266 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 ORAI1Q96D31 301 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 NMNAT3Q96T66 252 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 DNAJB12Q9NXW2 375 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 ZNF222Q9UK12 451 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 FBLP22087 321 aaKnown RBP13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 ARRB1P49407 418 aaPredicted RBP13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 FABP5Q01469 135 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 APOOLQ6UXV4 268 aa13.42□□□□□ -0.26
TRAFD1-201ENST00000257604 MARCH3Q86UD3 253 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms