RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 COL9A1P20849 921 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 LSSP48449 732 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 ILF3Q12906 894 aaKnown RBP eCLIP12.44□□□□□ -0.421e-18■□□□□ 9.3
VHL-201ENST00000256474 DUSP8Q13202 625 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 CAMK2BQ13554 666 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 ZMYND11Q15326 602 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 ST3GAL2Q16842 350 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 LEG1Q6P5S2 330 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 KIRREL2Q6UWL6 708 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 CCDC28AQ8IWP9 274 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 LNX2Q8N448 690 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 MEIOBQ8N635 442 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 PELI1Q96FA3 418 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 OR2A5Q96R48 311 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 SLX1AQ9BQ83 275 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 DTX4Q9Y2E6 619 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 SPEF1Q9Y4P9 236 aa12.44□□□□□ -0.42
VHL-201ENST00000256474 COL4A3Q01955 1670 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 C11orf98E9PRG8 122 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 SIX6O95475 246 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 ITPRIPL2Q3MIP1 535 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 YOD1Q5VVQ6 348 aaPredicted RBP12.43□□□□□ -0.42
VHL-201ENST00000256474 METAP1DQ6UB28 335 aaPredicted RBP12.43□□□□□ -0.42
VHL-201ENST00000256474 SLC35F2Q8IXU6 374 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 FAM109AQ8N4B1 249 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 ZNF784Q8NCA9 323 aaPredicted RBP12.43□□□□□ -0.42
VHL-201ENST00000256474 LRRC20Q8TCA0 184 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 THEM6Q8WUY1 208 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 KISS1RQ969F8 398 aaPredicted RBP12.43□□□□□ -0.42
VHL-201ENST00000256474 Q96M85 177 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 GAL3ST4Q96RP7 486 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 GINS4Q9BRT9 223 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 KIR3DX1Q9H7L2 352 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 ISYNA1Q9NPH2 558 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 MED17Q9NVC6 651 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 TMEM72A0PK05 275 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 GPR75O95800 540 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 AGR2O95994 175 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 ALDOBP05062 364 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 CTSEP14091 401 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 ITPKBP27987 946 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 PBX2P40425 430 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 BTG2P78543 158 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 FGD2Q7Z6J4 655 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 GPALPP1Q8IXQ4 340 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 OR2L13Q8N349 312 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 AVL9Q8NBF6 648 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 OR52I2Q8NH67 350 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 FAM174AQ8TBP5 190 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 CNN2Q99439 309 aaKnown RBP12.43□□□□□ -0.42
VHL-201ENST00000256474 DDOQ99489 341 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 COPS3Q9UNS2 423 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 SLC17A4Q9Y2C5 497 aa12.43□□□□□ -0.42
VHL-201ENST00000256474 CSN2P05814 226 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 NPR2P20594 1047 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 TMPRSS12Q86WS5 348 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 CMTM4Q8IZR5 234 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 PHOSPHO1Q8TCT1 267 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 ADAD1Q96M93 576 aaKnown RBP12.42□□□□□ -0.42
VHL-201ENST00000256474 MYADMQ96S97 322 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 TMEM138Q9NPI0 162 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 MKKSQ9NPJ1 570 aaPredicted RBP12.42□□□□□ -0.42
VHL-201ENST00000256474 C19orf53Q9UNZ5 99 aaPredicted RBP12.42□□□□□ -0.42
VHL-201ENST00000256474 CABIN1Q9Y6J0 2220 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 MAOAP21397 527 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 RBMS1P29558 406 aaKnown RBP12.42□□□□□ -0.42
VHL-201ENST00000256474 AQP2P41181 271 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 RAB14P61106 215 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 SIRPAP78324 504 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 ENPP2Q13822 863 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 C11orf88Q6PI97 169 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 APOOLQ6UXV4 268 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 OR4C3Q8NH37 302 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 RSC1A1Q92681 617 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 SLC22A18Q96BI1 424 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 SLC25A36Q96CQ1 311 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 WDR92Q96MX6 357 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 TIMP4Q99727 224 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 ZNF350Q9GZX5 532 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 NIPAL2Q9H841 368 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 CDV3Q9UKY7 258 aaKnown RBP12.42□□□□□ -0.42
VHL-201ENST00000256474 ERVK-19Q9WJR5 959 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 SLC22A7Q9Y694 548 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 LOC100509620A0A075B734 347 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 C17orf51A8MQB3 221 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 PRICKLE3O43900 615 aaPredicted RBP12.42□□□□□ -0.42
VHL-201ENST00000256474 ZNF250P15622 560 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 ANXA7P20073 488 aaKnown RBP12.42□□□□□ -0.42
VHL-201ENST00000256474 C9orf62Q8N4C0 152 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 RIT1Q92963 219 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 YIPF5Q969M3 257 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 TCF7L1Q9HCS4 588 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 FAM60AQ9NP50 221 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 MGAT4CQ9UBM8 478 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 HEBP2Q9Y5Z4 205 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 RTTNQ86VV8 2226 aa12.42□□□□□ -0.42
VHL-201ENST00000256474 NUPL2O15504 423 aaKnown RBP12.41□□□□□ -0.42
VHL-201ENST00000256474 ARL6IP5O75915 188 aa12.41□□□□□ -0.42
VHL-201ENST00000256474 EPXP11678 715 aa12.41□□□□□ -0.42
VHL-201ENST00000256474 NTSR1P30989 418 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms