RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 ADIPOR1Q96A54 375 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 CCDC74AQ96AQ1 378 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 ZNF501Q96CX3 271 aaPredicted RBP13.83□□□□□ -0.2
DDX49-201ENST00000247003 ZMYND19Q96E35 227 aaPredicted RBP13.83□□□□□ -0.2
DDX49-201ENST00000247003 DCLRE1CQ96SD1 692 aaKnown RBP13.83□□□□□ -0.2
DDX49-201ENST00000247003 GPX7Q96SL4 187 aaPredicted RBP13.83□□□□□ -0.2
DDX49-201ENST00000247003 IER2Q9BTL4 223 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 DUSP23Q9BVJ7 150 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 NUDT9Q9BW91 350 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 LAT2Q9GZY6 243 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 SYNDIG1Q9H7V2 258 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 C12orf10Q9HB07 376 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 NRIP3Q9NQ35 241 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 KLHL1Q9NR64 748 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 ADAM18Q9Y3Q7 739 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 EML5Q05BV3 1969 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 KNL1Q8NG31 2342 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 BLOC1S5-TXNDC5H3BN57 136 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 TOX3O15405 576 aaPredicted RBP13.83□□□□□ -0.2
DDX49-201ENST00000247003 SLC19A2O60779 497 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 SERPINA3P01011 423 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 NR0B1P51843 470 aaKnown RBP13.83□□□□□ -0.2
DDX49-201ENST00000247003 SLC3A1Q07837 685 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 GLYR1Q49A26 553 aaPredicted RBP13.83□□□□□ -0.2
DDX49-201ENST00000247003 ZMAT1Q5H9K5 638 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 TMEM91Q6ZNR0 172 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 SLC35F2Q8IXU6 374 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 SNX33Q8WV41 574 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 TBL1XR1Q9BZK7 514 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 WWTR1Q9GZV5 400 aa13.83□□□□□ -0.2
DDX49-201ENST00000247003 PCDH15Q96QU1 1955 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 ABCA7Q8IZY2 2146 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 IGKV1D-42A0A075B6H8 117 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 HCRTR2O43614 444 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 SERPINI2O75830 405 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 DHPSP49366 369 aaPredicted RBP13.82□□□□□ -0.2
DDX49-201ENST00000247003 GBX2P52951 348 aaPredicted RBP13.82□□□□□ -0.2
DDX49-201ENST00000247003 CSTF1Q05048 431 aaKnown RBP13.82□□□□□ -0.2
DDX49-201ENST00000247003 ZNF74Q16587 644 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 ALG10Q5BKT4 473 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 METAP1DQ6UB28 335 aaPredicted RBP13.82□□□□□ -0.2
DDX49-201ENST00000247003 CBLN3Q6UW01 205 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 GDPD3Q7L5L3 318 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 C9orf40Q8IXQ3 194 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 UBALD2Q8IYN6 164 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 MS4A15Q8N5U1 240 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 OR1N1Q8NGS0 311 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 OR6K6Q8NGW6 343 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 HPS1Q92902 700 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 NMNAT3Q96T66 252 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 ATF6BQ99941 703 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 NUDT22Q9BRQ3 303 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 VN1R1Q9GZP7 353 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 TIGARQ9NQ88 270 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 HIF3AQ9Y2N7 669 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 PCDHGB2Q9Y5G2 931 aa13.82□□□□□ -0.2
DDX49-201ENST00000247003 A0A1W2PQD3 144 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 OIP5O43482 229 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 NDUFB5O43674 189 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 NCR1O76036 304 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 NUDT14O95848 222 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 HIST1H2ABP04908 130 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 GIMD1P0DJR0 217 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 MYF5P13349 255 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 ITPKBP27987 946 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 PYCR1P32322 319 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 NAA10P41227 235 aaPredicted RBP13.81□□□□□ -0.2
DDX49-201ENST00000247003 EIF2B2P49770 351 aaKnown RBP13.81□□□□□ -0.2
DDX49-201ENST00000247003 OR12D2P58182 307 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 ERVK-25P63136 954 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 ACY1Q03154 408 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 IL10RAQ13651 578 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 INSL4Q14641 139 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.81□□□□□ -0.22e-8■■■■■ 36.5
DDX49-201ENST00000247003 GXYLT1Q4G148 440 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 TMEM71Q6P5X7 295 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 PAMR1Q6UXH9 720 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 HIST3H2AQ7L7L0 130 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 NANOGNBQ7Z5D8 188 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 SYS1Q8N2H4 156 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 LIPHQ8WWY8 451 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 HIST1H2ACQ93077 130 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 TXNDC15Q96J42 360 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 TIMP4Q99727 224 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 MMP25Q9NPA2 562 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 MUTYHQ9UIF7 546 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 TBC1D24Q9ULP9 559 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 ADAMTS20P59510 1910 aa13.81□□□□□ -0.2
DDX49-201ENST00000247003 TEX13CA0A0J9YWL9 993 aa13.8□□□□□ -0.2
DDX49-201ENST00000247003 A0A1W2PQ09 198 aa13.8□□□□□ -0.2
DDX49-201ENST00000247003 CDC14CA4D256 554 aa13.8□□□□□ -0.2
DDX49-201ENST00000247003 TO15178 435 aa13.8□□□□□ -0.2
DDX49-201ENST00000247003 EIF4E2O60573 245 aaKnown RBP13.8□□□□□ -0.2
DDX49-201ENST00000247003 HPGDSO60760 199 aa13.8□□□□□ -0.2
DDX49-201ENST00000247003 SLC25A12O75746 678 aa13.8□□□□□ -0.2
DDX49-201ENST00000247003 APEHP13798 732 aaKnown RBP13.8□□□□□ -0.2
DDX49-201ENST00000247003 SPNP16150 400 aa13.8□□□□□ -0.2
DDX49-201ENST00000247003 PNLIPP16233 465 aa13.8□□□□□ -0.2
DDX49-201ENST00000247003 SPI1P17947 270 aa13.8□□□□□ -0.2
DDX49-201ENST00000247003 PGCP20142 388 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms