RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 MAPK14Q16539 360 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 HFEQ30201 348 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 TMEM35AQ53FP2 167 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 CD276Q5ZPR3 534 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 METAP1DQ6UB28 335 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 CCDC36Q8IYA8 594 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR2L3Q8NG85 312 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR10K1Q8NGX5 313 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR52N1Q8NH53 320 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ABHD1Q96SE0 405 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 SPSB2Q99619 263 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ALG8Q9BVK2 526 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 PITHD1Q9GZP4 211 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR52D1Q9H346 318 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 PHF11Q9UIL8 331 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 DNASE2O00115 360 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 EFCAB14O75071 495 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 IGF2P01344 180 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 HMGN1P05114 100 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 CXCL2P19875 107 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 MAKP20794 623 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 PITPNBP48739 271 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 HOXA1P49639 335 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 RAB13P51153 203 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 SMCO1Q147U7 214 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 IRF4Q15306 451 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZNF836Q6ZNA1 936 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 BVESQ8NE79 360 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 SPPL3Q8TCT6 385 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 YIPF5Q969M3 257 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 MNTQ99583 582 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 PRSS27Q9BQR3 290 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 WDR26Q9H7D7 661 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 MED11Q9P086 117 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 SLC22A7Q9Y694 548 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 SGK494L7N484 410 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZNF593O00488 134 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 MAGEB4O15481 346 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 CHST10O43529 356 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 WDPCPO95876 746 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 RNF224P0DH78 156 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 THBS2P35442 1172 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 GNALP38405 381 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ANXA11P50995 505 aaKnown RBP8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 NUBP1P53384 320 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 BTG1P62324 171 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ACSM1Q08AH1 577 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 BAMBIQ13145 260 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 CLINT1Q14677 625 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 FAM78AQ5JUQ0 283 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 AGBL4Q5VU57 503 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 THSD4Q6ZMP0 1018 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 TMEFF1Q8IYR6 380 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ACBD7Q8N6N7 88 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 C17orf47Q8NEP4 570 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR10H4Q8NGA5 316 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR13C5Q8NGS8 318 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 TRMT10AQ8TBZ6 339 aaKnown RBP8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 NSMAFQ92636 917 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 CHFRQ96EP1 664 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ACTRT3Q9BYD9 372 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR51V1Q9H2C8 321 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 TMEM231Q9H6L2 316 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 POT1Q9NUX5 634 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ASB6Q9NWX5 421 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 BABAM2Q9NXR7 383 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 KLHL28Q9NXS3 571 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 PCOLCE2Q9UKZ9 415 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 RCE1Q9Y256 329 aa8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZNF443Q9Y2A4 671 aaPredicted RBP8.68□□□□□ -1.02
HLA-DOA-201ENST00000229829 TRIOO75962 3097 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 D6RAR5 112 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 SIGLEC6O43699 453 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 PRICKLE3O43900 615 aaPredicted RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 TIMP1P01033 207 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 GYPBP06028 91 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 PTHLHP12272 177 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 SNRPBP14678 240 aaKnown RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 PAICSP22234 425 aaKnown RBP8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 TEAD1P28347 426 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 NOS3P29474 1203 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 ACVR1BP36896 505 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZNF136P52737 540 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 DUSP5Q16690 384 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 SLC25A35Q3KQZ1 300 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 RAB11FIP2Q7L804 512 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 CMIPQ8IY22 773 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 CYB561A3Q8NBI2 242 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 OR2L8Q8NGY9 312 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 THAP6Q8TBB0 222 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 CA5BP1Q8WTZ4 195 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 HSD17B8Q92506 261 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 C3orf49Q96BT1 292 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 TEX101Q9BY14 249 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 AUNIPQ9H7T9 357 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 CTSFQ9UBX1 484 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 ZMIZ1Q9ULJ6 1067 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 LHX6Q9UPM6 363 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 WDR45Q9Y484 360 aa8.67□□□□□ -1.02
HLA-DOA-201ENST00000229829 NUBP2Q9Y5Y2 271 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms