RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 BPHLQ86WA6 291 aaPredicted RBP8.71□□□□□ -1.01
CCDC113-201ENST00000219299 BEST3Q8N1M1 668 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 JAGN1Q8N5M9 183 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 FAM86B1Q8N7N1 296 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 OR51G2Q8NGK0 314 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 OR2T35Q8NGX2 323 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 OR1L3Q8NH93 324 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 RHOXF1Q8NHV9 184 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 DNASE2BQ8WZ79 361 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 SLC41A3Q96GZ6 507 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 ZNF559Q9BR84 538 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 ASB6Q9NWX5 421 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 ASIC5Q9NY37 505 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 CTSFQ9UBX1 484 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 ACAD8Q9UKU7 415 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 PCOLCE2Q9UKZ9 415 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 CEP350Q5VT06 3117 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 TCRBV3S1A0A5B6 114 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 SLC35F4A4IF30 521 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 B4GAT1O43505 415 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 LCKP06239 509 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 ACTC1P68032 377 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 ACTA1P68133 377 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 GFOD2Q3B7J2 385 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 HS3ST5Q8IZT8 346 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 LNX2Q8N448 690 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 AMER3Q8N944 861 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 TM9SF4Q92544 642 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 CNRIP1Q96F85 164 aaPredicted RBP8.71□□□□□ -1.01
CCDC113-201ENST00000219299 HS6ST2Q96MM7 605 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 PINK1Q9BXM7 581 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 ERVMER34-1Q9H9K5 563 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 PRDM7Q9NQW5 492 aa8.71□□□□□ -1.01
CCDC113-201ENST00000219299 GREB1Q4ZG55 1949 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 LILRB5O75023 590 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 EVI2BP34910 448 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 EIF1AXP47813 144 aaKnown RBP8.71□□□□□ -1.02
CCDC113-201ENST00000219299 MRPL2Q5T653 305 aaKnown RBP8.71□□□□□ -1.02
CCDC113-201ENST00000219299 HES3Q5TGS1 186 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 FAM122CQ6P4D5 195 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 VN1R4Q7Z5H5 301 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 MEX3DQ86XN8 651 aaKnown RBP8.71□□□□□ -1.02
CCDC113-201ENST00000219299 NAXDQ8IW45 347 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 MFSD8Q8NHS3 518 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 ADAMTS16Q8TE57 1224 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 CLDN23Q96B33 292 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 ZNF160Q9HCG1 818 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 TEX13DA0A0J9YY54 714 aaPredicted RBP8.71□□□□□ -1.02
CCDC113-201ENST00000219299 ZNF878C9JN71 531 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 KCNK5O95279 499 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 GALEQ14376 348 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 BCL2L15Q5TBC7 163 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 ZNF101Q8IZC7 436 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 SLC25A45Q8N413 288 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 NEDD4LQ96PU5 975 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 SECISBP2Q96T21 854 aaKnown RBP8.71□□□□□ -1.02
CCDC113-201ENST00000219299 MMP28Q9H239 520 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 KCNN3Q9UGI6 736 aa8.71□□□□□ -1.02
CCDC113-201ENST00000219299 NPIPA2E9PIF3 369 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 NPIPA3F8WFD2 350 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 SMAD9O15198 467 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 CASC3O15234 703 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 ZNF208O43345 1280 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 FARS2O95363 451 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 CCL4P13236 92 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 GABREP78334 506 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 DUSP5Q16690 384 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 LRRC37A5PQ49AS3 106 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 ZNF793Q6ZN11 406 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 ADGRG5Q8IZF4 528 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 FANK1Q8TC84 345 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 FAM46AQ96IP4 442 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 C7orf34Q96L11 122 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 NAA11Q9BSU3 229 aaPredicted RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 SYT4Q9H2B2 425 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 NMNAT1Q9HAN9 279 aaPredicted RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 ACOT13Q9NPJ3 140 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 SLAMF7Q9NQ25 335 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 NPAP1Q9NZP6 1156 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 FBXL3Q9UKT7 428 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 SLC7A7Q9UM01 511 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 SLC35A3Q9Y2D2 325 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 KCNIP3Q9Y2W7 256 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 MRPS2Q9Y399 296 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 NUBP2Q9Y5Y2 271 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 PDCD11Q14690 1871 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 GPX2P18283 190 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 ADH6P28332 368 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 CPOXP36551 454 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 SSR4P51571 173 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 CXCR4P61073 352 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 UBE2IP63279 158 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 MRPL49Q13405 166 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 OR7G2Q8NG99 324 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 OR9Q2Q8NGE9 314 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 CCNL2Q96S94 520 aaPredicted RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 TCEAL7Q9BRU2 100 aa8.7□□□□□ -1.02
CCDC113-201ENST00000219299 UTP23Q9BRU9 249 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 CCDC86Q9H6F5 360 aaKnown RBP8.7□□□□□ -1.02
CCDC113-201ENST00000219299 CNIH4Q9P003 139 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms