RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 SIAH3Q8IW03 269 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 OR56A3Q8NH54 315 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 CHTF18Q8WVB6 975 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 PRRC1Q96M27 445 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 TBL1XR1Q9BZK7 514 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF576Q9H609 170 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 ZFP57Q9NU63 452 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 RLIMQ9NVW2 624 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 CA14Q9ULX7 337 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 LOC105371267A0A1B0GV96 52 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 FAM183AA6NL82 134 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 CRTAPO75718 401 aaPredicted RBP11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 PNPP00491 289 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 IFNA2P01563 188 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 MAOAP21397 527 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 BTG1P62324 171 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 RAB40BQ12829 278 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 RUNX3Q13761 415 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 NKPD1Q17RQ9 610 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 CDNFQ49AH0 187 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 PYCR3Q53H96 274 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 FAM69AQ5T7M9 428 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF283Q8N7M2 679 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 OR51L1Q8NGJ5 315 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 OR6S1Q8NH40 331 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 OR2A14Q96R47 310 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC17A9Q9BYT1 436 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 DPH1Q9BZG8 443 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 PIGMQ9H3S5 423 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 ACTL8Q9H568 366 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 BRWD1Q9NSI6 2320 aa11.3□□□□□ -0.6
TSPAN9-201ENST00000011898 TRBV2A0A0J9YWF9 115 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 MEIS3P1A6NDR6 274 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 NAP1L6A6NFF2 107 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 EIF1AYO14602 144 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 CLEC3AO75596 197 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 EIF1AXP47813 144 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 PCP4P48539 62 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 ART1P52961 327 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 SMAP2Q8WU79 429 aaPredicted RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 ATG5Q9H1Y0 275 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 TRAV18A0A075B6X5 111 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 A0A0A6YYJ9 748 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 CASC3O15234 703 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 RBMXL2O75526 392 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 CSTAP01040 98 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC6A12P48065 614 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 SRP9P49458 86 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 HYAL4Q2M3T9 481 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 RPL13AP3Q6NVV1 102 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 TSSK4Q6SA08 328 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 TMUB2Q71RG4 321 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 TIPARPQ7Z3E1 657 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF584Q8IVC4 421 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 OR8D4Q8NGM9 314 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 LINC00052Q96N35 136 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 GXYLT2A0PJZ3 443 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 SCDO00767 359 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 RNGTTO60942 597 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 MED6O75586 246 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 SOX30O94993 753 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 TNFP01375 233 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 RPS15AP62244 130 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 PRDX1Q06830 199 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 GPR50Q13585 617 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 RNASE10Q5GAN6 216 aaKnown RBP11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 FAM74A1Q5RGS3 127 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 C6orf132Q5T0Z8 1188 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 GATSQ8NAP1 163 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 OR5T1Q8NG75 326 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 SHDQ96IW2 340 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 SFXN1Q9H9B4 322 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 COPS7AQ9UBW8 275 aa11.29□□□□□ -0.6
TSPAN9-201ENST00000011898 GPX5O75715 221 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 HIST1H1TP22492 207 aaPredicted RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 RBMXP38159 391 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 MASP1P48740 699 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 RPS25P62851 125 aaKnown RBP11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 CDK3Q00526 305 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ILKQ13418 452 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF683Q8IZ20 524 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 FRZBQ92765 325 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 YIPF6Q96EC8 236 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 DNAJA3Q96EY1 480 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 LYSMD1Q96S90 227 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC6A13Q9NSD5 602 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 CENPMQ9NSP4 180 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 SLC6A5Q9Y345 797 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 URGCP-MRPS24S4R325 110 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 C17orf113A0A1B0GUU1 675 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 FZD7O75084 574 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 HTR1AP08908 422 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 BDKRB2P30411 391 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 AHRP35869 848 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 DECR1Q16698 335 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 TMEM205Q6UW68 189 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF550Q7Z398 422 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ADGRG3Q86Y34 549 aa11.28□□□□□ -0.6
TSPAN9-201ENST00000011898 ZNF101Q8IZC7 436 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms