RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 AspdhQ9DCQ2 287 aa8.34□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mgl2A9XX86 381 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Adamtsl5D3Z689 485 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Bcl2l11O54918 196 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ufd1P70362 307 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Hp1bp3Q3TEA8 554 aaKnown RBP8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Nufip2Q5F2E7 692 aaKnown RBP8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mup20Q5FW60 181 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 PhgdhQ61753 533 aaKnown RBP8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Stoml3Q6PE84 287 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pld4Q8BG07 503 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Znf879Q8BI99 563 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tspan12Q8BKT6 305 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 LssQ8BLN5 733 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fam214bQ8BR27 538 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 FarsaQ8C0C7 508 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Plcz1Q8K4D7 647 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Dtx2Q8R3P2 619 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rpusd1Q8VCZ8 306 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1048Q8VGS2 320 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pcdhac1Q91Y10 964 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fuca1Q99LJ1 452 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Necap1Q9CR95 275 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gar1Q9CY66 231 aaKnown RBP8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Uqcrc1Q9CZ13 480 aaKnown RBP8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Q9DAE8 263 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fn3kQ9ER35 309 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Trappc2lQ9JME7 139 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Actl7aQ9QY84 440 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 QkiQ9QYS9 341 aaKnown RBP8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Lhx6Q9R1R0 363 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Psmd13Q9WVJ2 376 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Magi2Q9WVQ1 1275 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 AireQ9Z0E3 552 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ltbp2O08999 1813 aa8.33□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc23a4A0A0J9YUX7 615 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn2r-ps130A0A140T8U3 855 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mthfd2lD3YZG8 338 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn2r56E9Q4U5 779 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Lipo1J3QME6 396 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ugt1a6bK9J7B2 531 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cx3cl1O35188 395 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 P06330 118 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Scd1P13516 355 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cd72P21855 354 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Acot8P58137 320 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr629Q0VBH3 314 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 A3galt2Q3V1N9 370 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Wdr18Q4VBE8 431 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ang6Q5GAN0 147 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 PtafrQ62035 341 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Orai3Q6P8G8 290 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Dcaf13Q6PAC3 445 aaKnown RBP8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Kcnk10Q8BUW1 535 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 MslnlQ8C160 685 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rad51ap1Q8C551 337 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Retreg1dQ8VE91 480 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ccdc71Q8VEG0 433 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr126Q8VGF0 319 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1Q8VGI1 314 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mrgpra2Q91WW4 305 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 EpgnQ924X1 152 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cpt1bQ924X2 772 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Izumo2Q9DA16 220 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 MNCb-2990Q9JJ93 142 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Aqp9Q9JJJ3 295 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm5538W4VSP6 401 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn1r10W4VSP8 311 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Med23Q80YQ2 1367 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Lrr1D3YY91 422 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm21994F6T2D2 329 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 AponG3X9D6 251 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn1r115K7N6Y3 295 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 RaxO35602 342 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Wnt2bO70283 389 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mdh2P08249 338 aaKnown RBP8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ly6dP35459 127 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Sf3b6P59708 125 aaKnown RBP8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 HrkP62816 92 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Epha2Q03145 977 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fbxw18Q3TSA9 469 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fkbp10Q61576 581 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 HlxQ61670 476 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Kiaa0895Q7TQE7 519 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr594Q7TRR4 311 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Zfp9Q8BIS1 454 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pcdh20Q8BIZ0 952 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Csnk1a1Q8BK63 337 aaKnown RBP8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 LmlnQ8BMN4 681 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tsen54Q8C2A2 525 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pabpc5Q8C7D3 381 aaKnown RBP8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Clip4Q8CI96 704 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tmprss3Q8K1T0 453 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rab31Q921E2 194 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Nxf1Q99JX7 618 aaKnown RBP8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Txndc12Q9CQU0 170 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mpped2Q9CZJ0 294 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Dda1Q9D9Z5 102 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Q9DAQ5 155 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Erv3Q9DAX3 200 aa8.32□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 68.2 ms