RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Adam5Q3TTE0 751 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 GabrpQ8QZW7 440 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Lrch4Q921G6 680 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 ClpsQ9CQC2 113 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Chrm3Q9ERZ3 589 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Nxt1Q9QZV9 140 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tmem176bQ9R1Q6 263 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr601A2RS33 314 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Shisa8J3QNX5 399 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ifi204P0DOV2 619 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tmem165P52875 323 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gng2P63213 71 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Epha4Q03137 986 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Klri2Q5DT36 248 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1115Q7TR53 326 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ncs1Q8BNY6 190 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Prmt3Q922H1 532 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Dennd6bQ9D9V7 585 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Moap1Q9ERH6 352 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Actr10Q9QZB7 417 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Clk4O35493 481 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fcn1O70165 334 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Emc8O70378 207 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 MthfsdQ3URQ7 372 aaKnown RBP11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Pdp1Q3UV70 538 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 QdprQ8BVI4 241 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Q8R2K8 148 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ugt2b37Q8VCN3 530 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr160Q8VGE3 309 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr676Q8VGZ9 317 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 MallQ91X49 154 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Chmp1aQ921W0 196 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Borcs8Q9D6Y4 120 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1156A2AVC3 323 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm42791D3YYB5 209 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr574F8VQ18 346 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zfand5O88878 213 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Lire1P11260 357 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Wnt4P22724 351 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Myf5P24699 255 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 ArsaP50428 506 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Csnk2a1Q60737 391 aaKnown RBP11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ing4Q8C0D7 249 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Krtcap3Q8K177 240 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr229Q8VFN5 307 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tmem63aQ91YT8 804 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 2410137M14RikQ9CWF0 162 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Brix1Q9DCA5 353 aaKnown RBP11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tsc22d3Q9Z2S7 137 aa11.05□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Lilra6A0A0B4J1F3 663 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm28729A0A1B0GSW2 409 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Sox3P53784 375 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Arpc4P59999 168 aaKnown RBP11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 PrkacbP68181 351 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cbx5Q61686 191 aaKnown RBP11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Abhd17bQ7M759 288 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ankmy1Q8C0W1 906 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 RfesdQ8K2P6 157 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 PiguQ8K358 434 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr516Q8VFZ5 314 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Spesp1Q9D5A0 399 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rab25Q9WTL2 213 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fhl5Q9WTX7 284 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Klhl15A2AAX3 604 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Q3KQP7 184 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 EloaQ8CB77 773 aaKnown RBP11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Q8K039 155 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 PpcsQ8VDG5 311 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr870Q8VGG4 311 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 2410141K09RikK7N769 464 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Atp5j2P56135 88 aaKnown RBP11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Nanos3P60324 178 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1135Q7TR42 310 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Chst14Q80V53 376 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zik1Q80YP6 463 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Sult2a8Q8BGL3 282 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cept1Q8BGS7 416 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 CyrenQ8BHZ5 157 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rspry1Q8BVR6 576 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Snap29Q9ERB0 260 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Sema6cQ9WTM3 931 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Taf1Q80UV9 1891 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tp53bp1P70399 1969 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tmem233D3Z1U7 110 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fbxw15L7N1X6 466 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm5724L7N264 670 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zfp59P16373 634 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rfx3P48381 749 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cdkn2dQ60773 166 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 AntxrlQ8BVM2 641 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn1r85Q8VIB8 308 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Polr2hQ923G2 150 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Nol3Q9D1X0 220 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tssk4Q9D411 328 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Elovl4Q9EQC4 312 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Dnajb8Q9QYI7 227 aa11.04□□□□□ -0.64
Pcif1-201ENSMUST00000041643 A630095N17RikJ3KMM7 116 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Nmur1O55040 428 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Galr3O88853 370 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 RpiaP47968 303 aa11.03□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms