RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Htr7P32304 448 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Grm5Q3UVX5 1203 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Prmt8Q6PAK3 394 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rps27lQ6ZWY3 84 aaKnown RBP15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slc5a8Q8BYF6 611 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tspan15F7BWT7 294 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vmn2r75G5E8Z7 853 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 CtnsP57757 367 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Smim15Q3UTD9 74 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Grhl3Q5FWH3 603 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gpr17Q6NS65 339 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rpl35Q6ZWV7 123 aaKnown RBP15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Subh2bvQ9D9Z7 123 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1206A2ATJ9 307 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 TspearJ3S6Y1 670 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Fgf18O89101 207 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Hoxc12Q8K5B8 280 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr791Q8VGJ0 312 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Irs2P81122 1321 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Als2Q920R0 1651 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Usp2O88623 613 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 PlgP20918 812 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Crhr1P35347 415 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Bpifb2Q8C1E1 462 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 P2rx2Q8K3P1 485 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1163Q8VFR4 316 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Atg2bQ80XK6 2075 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 AmbnO55189 407 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Ceacam19Q3TQ88 271 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rab43Q8CG50 210 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cys1Q8R4T1 145 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr167Q8VGJ5 312 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Arpc5lQ9D898 153 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cpn2Q9DBB9 547 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Adamdec1Q9R0X2 467 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Zfp758E9QAA1 583 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 SparcP07214 302 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 SgcaP82350 387 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cypt4Q6P925 153 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 H2-M10.2Q85ZW9 329 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Mitd1Q8VDV8 249 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 EpcamQ99JW5 315 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Sacm1lQ9EP69 587 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 MvkQ9R008 395 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 D17h6s53eQ9Z1R4 293 aa15.62■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr1555-ps1A0A140LHT7 321 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Snrpd2P62317 118 aaKnown RBP15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Map3k8Q07174 467 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Fam105aQ3TVP5 353 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Pcdhga7Q6DD96 935 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr58Q7TRF6 309 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Irf2bplQ8K3X4 775 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Abhd6Q8R2Y0 336 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Zfp395E9Q5N9 508 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Wdr92Q8BGF3 357 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Asb13Q8VBX0 278 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cyp4v2Q9DBW0 525 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Tpi1P17751 299 aaKnown RBP15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Chrm4P32211 479 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 FuzQ3UYI6 415 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 CcsapQ8QZT2 252 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vmn1r226Q8R2A8 298 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Yif1bQ9CX30 311 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Mfsd1Q9DC37 464 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Pin1rt1Q3ULQ2 159 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Prss34Q80UR4 318 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Thyn1Q91YJ3 226 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Cd209cQ91ZW9 178 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr634-ps1A0A1B0GRN7 318 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Htra4A2RT60 483 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Akain1G3UWD5 69 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Galnt9G3X942 604 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Pot1bH7BX60 640 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Vmn1r159K7N701 305 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Agpat1O35083 285 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 F10O88947 481 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Amy1P00687 511 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 CtswP56203 371 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Wdr5P61965 334 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 KhkP97328 298 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Onecut3Q8K557 490 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Slc25a46Q9CQS4 418 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm11239E9Q5Z9 360 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm11237F2Z3W5 360 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm11238F2Z478 360 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Atp1b1P14094 304 aaKnown RBP15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gjb3P28231 270 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Flt3lgP49772 232 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Kcnk6Q3TBV4 313 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gm428Q3UTE2 360 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Calhm5Q8R100 309 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Chchd4Q8VEA4 139 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Olfr352Q8VGJ9 315 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Itfg2Q91WI7 443 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Snx18Q91ZR2 614 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Gdpd1Q9CRY7 314 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Adra2bP30545 450 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 PrkczQ02956 592 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 Rac2Q05144 192 aa15.61■□□□□ 0.09
Ccdc88a-201ENSMUST00000040182 StgQ8BM15 349 aa15.61■□□□□ 0.09
Retrieved 100 of 22,080 RNA–protein pairs in 109.5 ms