RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 Vmn1r9A2RST7 299 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 9230113P08RikD3YWX3 137 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm11236J3QMS7 360 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Ms4a18J3QN01 344 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Il10P18893 178 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Sec61a1P61620 476 aaKnown RBP9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Q3TTL0 348 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Slc5a6Q5U4D8 634 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Fbxo34Q80XI1 695 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gpr89aQ8BS95 455 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Csnk1g1Q8BTH8 459 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Fem1abQ8C0T1 654 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm5591Q8CDK1 855 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Pno1Q9CPS7 248 aaKnown RBP9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Ier3ip1Q9CR20 82 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 4930553M12RikQ9CUH1 165 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Med18Q9CZ82 208 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dimt1Q9D0D4 313 aaKnown RBP9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Slco6d1Q9D5W6 683 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Herpud2Q9JJC9 404 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Fem1aaQ9Z2G1 654 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn1r10W4VSP8 311 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Col2a1P28481 1487 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Ptpn22P29352 802 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Hsd11b1P50172 292 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Hrh2P97292 397 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Tle3Q08122 772 aaKnown RBP9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Mdga1Q0PMG2 940 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Grxcr1Q50H32 290 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Pced1aQ6P1Z5 449 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1162Q7TR28 314 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Rims3Q80U57 307 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gpr68Q8BFQ3 365 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Znf689Q8BKK5 500 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn1r6Q8R2D4 303 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Rdh10Q8VCH7 341 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr347Q8VGK2 312 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn2r80E9Q1L0 863 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr773F6VS78 311 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr893K7N678 312 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1360K9J6X0 313 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn2r60L7N2A1 853 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 FiglaO55208 194 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Kcnk4O88454 398 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Hbb-yP02104 147 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 CluQ06890 448 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Csnk2a1Q60737 391 aaKnown RBP9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Il10raQ61727 575 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1359Q7TQU5 313 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr845Q7TRG2 312 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Zar1Q80SU3 361 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Zfp189Q8BKP2 608 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr772Q8VGC5 311 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 HpgdsQ9JHF7 199 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cldn6Q9Z262 219 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm4950D3YUM8 205 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Btbd2E9PUS2 523 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn2r106E9PY92 862 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gpr31F8VQN3 319 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Kcnj5P48545 419 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Trnp1Q80ZI1 223 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Spns1Q8R0G7 528 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dhcr24Q8VCH6 516 aaKnown RBP9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Med6Q921D4 246 aaKnown RBP9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cers4Q9D6J1 393 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Wdr53Q9DB94 358 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr44Q9EQB8 314 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 C1qtnf3Q9ES30 246 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cdh20Q9Z0M3 801 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Sult2a3D3Z1W5 285 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 4930451I11RikE9Q9R3 111 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1348F6VB59 318 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gstm6O35660 218 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dpf3P58269 378 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Jmjd8Q3TA59 316 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Gm5127Q3UQH6 212 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Slc35g3Q5F297 340 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Slc38a8Q5HZH7 432 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 CfiQ61129 603 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Tmem127Q8BGP5 238 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Cdt1Q8R4E9 557 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Abhd4Q8VD66 342 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr461Q8VF30 313 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Hint3Q9CPS6 165 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Ctrb1Q9CR35 263 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Bex3Q9WTZ9 124 aa9.53□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Dcst2A0A140LIJ0 701 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Vmn2r45L7N2B5 852 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Crabp1P62965 137 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 EvlP70429 414 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Jagn1Q5XKN4 183 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 BC061237Q6P8I2 184 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr1225Q7TR01 311 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Olfr304Q7TS03 333 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Entpd8Q8K0L2 497 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 CcsapQ8QZT2 252 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Usp3Q91W36 520 aaKnown RBP9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 Pop7Q9DCH2 140 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 TollipQ9QZ06 274 aa9.52□□□□□ -0.88
Ubr1-201ENSMUST00000028728 BC034090A0A087WP46 1202 aa9.52□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 36.9 ms