RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TBPL2Q6SJ96 375 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 ZNF730Q6ZMV8 503 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 TMPPEQ6ZT21 453 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 ESPNLQ6ZVH7 1005 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 MBOAT2Q6ZWT7 520 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 PRICKLE2Q7Z3G6 844 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 PQLC1Q8N2U9 271 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 ATP6V1C2Q8NEY4 427 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 OR5K1Q8NHB7 308 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 WDYHV1Q96HA8 205 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 KLHL4Q9C0H6 718 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 MEPEQ9NQ76 525 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-213ENST00000642137 VNN3Q9NY84 501 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 C6orf203Q9P0P8 240 aaPredicted RBP11.09□□□□□ -0.63
LINC00339-213ENST00000642137 SPRR3Q9UBC9 169 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 TRAPPC4Q9Y296 219 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 GTF3C1Q12789 2109 aa11.09□□□□□ -0.63
LINC00339-213ENST00000642137 MPDZO75970 2070 aa11.08□□□□□ -0.63
LINC00339-213ENST00000642137 TRAV36DV7A0A075B6V5 113 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 A0A0J9YW62 118 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 ZC3H12DA2A288 527 aaKnown RBP11.08□□□□□ -0.64
LINC00339-213ENST00000642137 CCNB2O95067 398 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 PMS2P2O95744 297 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 BAG2O95816 211 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 OPN1LWP04000 364 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 TFPIP10646 304 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 EDN3P14138 238 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 ANPEPP15144 967 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF708P17019 499 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 SFTPDP35247 375 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 IFNGR2P38484 337 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 SUCLG1P53597 346 aaKnown RBP11.08□□□□□ -0.64
LINC00339-213ENST00000642137 UGT2B15P54855 530 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 CTBP2P56545 445 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 PPP1R8Q12972 351 aaKnown RBP11.08□□□□□ -0.64
LINC00339-213ENST00000642137 SEC23BQ15437 767 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 C1orf140Q5VVS0 124 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 TMEM179BQ7Z7N9 219 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 GGNQ86UU5 652 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 HIPK1Q86Z02 1210 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 PM20D2Q8IYS1 436 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 CDK20Q8IZL9 346 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 SVOPLQ8N434 492 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 MEIOBQ8N635 442 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 OR4K5Q8NGD3 323 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 MFSD8Q8NHS3 518 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 CPT1CQ8TCG5 803 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 GIPC3Q8TF64 312 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 TAAR8Q969N4 342 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 KTI12Q96EK9 354 aaPredicted RBP11.08□□□□□ -0.64
LINC00339-213ENST00000642137 ADGRG7Q96K78 797 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 ARL5BQ96KC2 179 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 KLHL15Q96M94 604 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 OR11A1Q9GZK7 315 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 STX18Q9P2W9 335 aaKnown RBP11.08□□□□□ -0.64
LINC00339-213ENST00000642137 U3KQV3 271 aa11.08□□□□□ -0.64
LINC00339-213ENST00000642137 USP24Q9UPU5 2620 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 ARRDC5A6NEK1 342 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 AHRRA9YTQ3 701 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 NPIPA2E9PIF3 369 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 NPIPA3F8WFD2 350 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 H0Y3Z8 333 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 SULT2B1O00204 365 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 BCKDKO14874 412 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 OR10H3O60404 316 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 FZD7O75084 574 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 E2F6O75461 281 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 AHSA1O95433 338 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 IMPDH2P12268 514 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 SHC1P29353 583 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 PTGS2P35354 604 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 IST1P53990 364 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 MLLT10P55197 1068 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 CLDN15P56746 228 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 CLDN20P56880 219 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 CARD18P57730 90 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 RPS3AP61247 264 aaKnown RBP11.07□□□□□ -0.64
LINC00339-213ENST00000642137 CSNK2A1P68400 391 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-213ENST00000642137 MFSD13AQ14CX5 517 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 RCN1Q15293 331 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 CTU2Q2VPK5 515 aaKnown RBP11.07□□□□□ -0.64
LINC00339-213ENST00000642137 PRR30Q53SZ7 412 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-213ENST00000642137 FAM69AQ5T7M9 428 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 WLSQ5T9L3 541 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 C1QL3Q5VWW1 255 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 C1orf94Q6P1W5 598 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 SHQ1Q6PI26 577 aaKnown RBP11.07□□□□□ -0.64
LINC00339-213ENST00000642137 TMPRSS11FQ6ZWK6 438 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 CHERPQ8IWX8 916 aaKnown RBP11.07□□□□□ -0.64
LINC00339-213ENST00000642137 NRMQ8IXM6 262 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 OR2V1Q8NHB1 315 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 PFN4Q8NHR9 129 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 PIGXQ8TBF5 258 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 ZPLD1Q8TCW7 415 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 GNPDA2Q8TDQ7 276 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 LIPHQ8WWY8 451 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 SMPDL3BQ92485 455 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 OSTF1Q92882 214 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 MIB2Q96AX9 1013 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 SGTBQ96EQ0 304 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms