RNA–Protein interactions for RNA: ENST00000642041.1

PHGDH-234, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-234ENST00000642041 POU1F1P28069 291 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 PTGER4P35408 488 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 ACAA2P42765 397 aaKnown RBP15.69■□□□□ 0.1
PHGDH-234ENST00000642041 NCF4Q15080 339 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 KLHL22Q53GT1 634 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 ARMC4Q5T2S8 1044 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 FAM198BQ6UWH4 519 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 LINC00114Q6XXX2 140 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 RTL4Q6ZR62 310 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 KCTD8Q6ZWB6 473 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 LAPTM4BQ86VI4 370 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 NFAM1Q8NET5 270 aaPredicted RBP15.69■□□□□ 0.1
PHGDH-234ENST00000642041 OR2T33Q8NG76 320 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 OR2Y1Q8NGV0 311 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 TMEM234Q8WY98 164 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 RORBQ92753 470 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 PLEKHA8Q96JA3 519 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 SECISBP2Q96T21 854 aaKnown RBP15.69■□□□□ 0.1
PHGDH-234ENST00000642041 ZNF426Q9BUY5 554 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 GPR87Q9BY21 358 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 FN3KQ9H479 309 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 FBXO34Q9NWN3 711 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 PSORS1C1Q9UIG5 152 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 DTX4Q9Y2E6 619 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 PCDHGB5Q9Y5G0 923 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 NPFFR2Q9Y5X5 522 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 COMMD3-BMI1R4GMX3 469 aa15.69■□□□□ 0.1
PHGDH-234ENST00000642041 PCSK5Q92824 1860 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 A0A087WUJ7 227 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 LRRTM2O43300 516 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 KLF4O43474 513 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 NDUFB5O43674 189 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 CDC40O60508 579 aaKnown RBP eCLIP15.68■□□□□ 0.1
PHGDH-234ENST00000642041 CNOT3O75175 753 aaKnown RBP15.68■□□□□ 0.1
PHGDH-234ENST00000642041 BCAS1O75363 584 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-234ENST00000642041 IGKV1D-16P01601 117 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 GABRB1P18505 474 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 ABCD3P28288 659 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 FOLR3P41439 243 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 PCYT1AP49585 367 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 C17orf67Q0P5P2 114 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 CTU2Q2VPK5 515 aaKnown RBP15.68■□□□□ 0.1
PHGDH-234ENST00000642041 PLEKHN1Q494U1 663 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-234ENST00000642041 COMTD1Q86VU5 262 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 NRMQ8IXM6 262 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 C9orf40Q8IXQ3 194 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 SPARTQ8N0X7 666 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 FDCSPQ8NFU4 85 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 OR4N2Q8NGD1 307 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 OR4C3Q8NH37 302 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 PHOSPHO1Q8TCT1 267 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 CNOT9Q92600 299 aaKnown RBP15.68■□□□□ 0.1
PHGDH-234ENST00000642041 OMA1Q96E52 524 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 IP6K3Q96PC2 410 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 H2AFY2Q9P0M6 372 aaPredicted RBP15.68■□□□□ 0.1
PHGDH-234ENST00000642041 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.68■□□□□ 0.1
PHGDH-234ENST00000642041 ICAM5Q9UMF0 924 aa15.68■□□□□ 0.1
PHGDH-234ENST00000642041 A0A1B0GWA3 101 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 UNC119BA6NIH7 251 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 PTGES3LE9PB15 166 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 TP53I11O14683 189 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 IDH3BO43837 385 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 TRMUO75648 421 aaKnown RBP15.67■□□□□ 0.1
PHGDH-234ENST00000642041 GRK5P34947 590 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 CAPZA2P47755 286 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 ST13P50502 369 aaKnown RBP15.67■□□□□ 0.1
PHGDH-234ENST00000642041 TMBIM6P55061 237 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 RPS15P62841 145 aaKnown RBP15.67■□□□□ 0.1
PHGDH-234ENST00000642041 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.67■□□□□ 0.1
PHGDH-234ENST00000642041 CBFBQ13951 182 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 GINS1Q14691 196 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 FNDC7Q5VTL7 733 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 TMEM81Q6P7N7 255 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 NKAIN4Q8IVV8 208 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 STX19Q8N4C7 294 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 APCDD1LQ8NCL9 501 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 LIPHQ8WWY8 451 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 BPIFA2Q96DR5 249 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 ARSGQ96EG1 525 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 ADOQ96SZ5 270 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 PRSS27Q9BQR3 290 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 WFDC6Q9BQY6 131 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 COPS4Q9BT78 406 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 DEFB126Q9BYW3 111 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 ZNF700Q9H0M5 742 aa15.67■□□□□ 0.1
PHGDH-234ENST00000642041 RSL24D1Q9UHA3 163 aaKnown RBP15.67■□□□□ 0.1
PHGDH-234ENST00000642041 ZG16O60844 167 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 WBP4O75554 376 aaKnown RBP15.66■□□□□ 0.1
PHGDH-234ENST00000642041 GKN3PP0CG01 181 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 IFI30P13284 250 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 SLC1A3P43003 542 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 P2RX1P51575 399 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 PRPS1P60891 318 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 SNTA1Q13424 505 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 SSPNQ14714 243 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 SNAPC1Q16533 368 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 ANKRD34AQ69YU3 496 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 PLAG1Q6DJT9 500 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 OPN5Q6U736 354 aa15.66■□□□□ 0.1
PHGDH-234ENST00000642041 OLIG3Q7RTU3 272 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms