RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 GPR171O14626 319 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 OGG1O15527 345 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 PLRG1O43660 514 aaKnown RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 SSTR2P30874 369 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 ACAA2P42765 397 aaKnown RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 ADPRHP54922 357 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 CRYZQ08257 329 aaKnown RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 SRSF5Q13243 272 aaKnown RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 CAMK2DQ13557 499 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 CDK5R1Q15078 307 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 LGALSLQ3ZCW2 172 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 PRRT3Q5FWE3 981 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 FIGLAQ6QHK4 219 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 ADAMTS14Q8WXS8 1223 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 OR2M2Q96R28 347 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 TMEM168Q9H0V1 697 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 RANBP3Q9H6Z4 567 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-233ENST00000642021 ANKRD10Q9NXR5 420 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 FLVCR2Q9UPI3 526 aa12.73□□□□□ -0.37
PHGDH-233ENST00000642021 A0A087WV48 116 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 POU2F2P09086 479 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 PSMB10P40306 273 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 LSSP48449 732 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 SNTB2Q13425 540 aaKnown RBP12.72□□□□□ -0.37
PHGDH-233ENST00000642021 KLF9Q13886 244 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ANGPT1Q15389 498 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 TMEM255AQ5JRV8 349 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ZNF613Q6PF04 617 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 OR8H3Q8N146 312 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 SMIM19Q96E16 107 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 MAP6Q96JE9 813 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ZNF426Q9BUY5 554 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 NKIRAS2Q9NYR9 191 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 COPS3Q9UNS2 423 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ADAM18Q9Y3Q7 739 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 IDSB3KWA1 339 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 H0YGG7 62 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ZNF593O00488 134 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-233ENST00000642021 FLRT2O43155 660 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 GMDSO60547 372 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 GPR75O95800 540 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 RAF1P04049 648 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 H2AFB2P0C5Z0 115 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ACTR1BP42025 376 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ACTR1AP61163 376 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ARF3P61204 181 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-233ENST00000642021 SIRPAP78324 504 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 POU6F2P78424 691 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-233ENST00000642021 GXYLT1Q4G148 440 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 STPG1Q5TH74 334 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 HACD4Q5VWC8 232 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ZNF776Q68DI1 518 aaPredicted RBP12.72□□□□□ -0.37
PHGDH-233ENST00000642021 CMTM4Q8IZR5 234 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 LGALS14Q8TCE9 139 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 FAM3CQ92520 227 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 STACQ99469 402 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 GFI1Q99684 422 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 STARD5Q9NSY2 213 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 EVA1BQ9NVM1 165 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 ABRACLQ9P1F3 81 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 CHRNA9Q9UGM1 479 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 F5P12259 2224 aa12.72□□□□□ -0.37
PHGDH-233ENST00000642021 A0A087WV62 115 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 MCIDASD6RGH6 385 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 PIN1P1O15428 100 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 TNFSF14O43557 240 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 IGKV1D-16P01601 117 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 APODP05090 189 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 UCHL1P09936 223 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 ZP1P60852 638 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 SFRP4Q6FHJ7 346 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-233ENST00000642021 SFTPA2Q8IWL1 248 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 FAM98AQ8NCA5 519 aaKnown RBP12.71□□□□□ -0.37
PHGDH-233ENST00000642021 ZPLD1Q8TCW7 415 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 SLC2A12Q8TD20 617 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 DACT3Q96B18 629 aaPredicted RBP12.71□□□□□ -0.37
PHGDH-233ENST00000642021 SORCS2Q96PQ0 1159 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 RPP25Q9BUL9 199 aaKnown RBP12.71□□□□□ -0.37
PHGDH-233ENST00000642021 TRPV4Q9HBA0 871 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 CD93Q9NPY3 652 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 UCKL1Q9NWZ5 548 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 SERTAD3Q9UJW9 196 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 SPATA2Q9UM82 520 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 ICAM5Q9UMF0 924 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 CAMK2AQ9UQM7 478 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 PCDHGA9Q9Y5G4 932 aaKnown RBP12.71□□□□□ -0.37
PHGDH-233ENST00000642021 IER3IP1Q9Y5U9 82 aa12.71□□□□□ -0.37
PHGDH-233ENST00000642021 TRBV2A0A0J9YWF9 115 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 OR6C74A6NCV1 312 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 PSMD9O00233 223 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 HCRTR1O43613 425 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 CBX7O95931 251 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 TPOP07202 933 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 SULT1A3P0DMM9 295 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 SULT1A4P0DMN0 295 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 GDNFP39905 211 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 KIR2DL1P43626 348 aaPredicted RBP12.71□□□□□ -0.38
PHGDH-233ENST00000642021 ACTC1P68032 377 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 ACTA1P68133 377 aa12.71□□□□□ -0.38
PHGDH-233ENST00000642021 FAM53BQ14153 422 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms