RNA–Protein interactions for RNA: ENST00000641487.1

CASC19-233, Transcript of cancer susceptibility 19, human

Gene CASC19, Length 966 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-233	ENST00000641487	ABHD11	Q8NFV4	315 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	OR9A1P	Q8NGU1	263 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	RAB3IL1	Q8TBN0	382 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	ZNF354B	Q96LW1	612 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	ZNF48	Q96MX3	618 aa	Predicted RBP	5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	GPR137	Q96N19	417 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	EBNA1BP2	Q99848	306 aa	Known RBP	5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	TRMO	Q9BU70	441 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	IL22	Q9GZX6	179 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	IQCG	Q9H095	443 aa	Known RBP	5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	CDH20	Q9HBT6	801 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	HHATL	Q9HCP6	504 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	HINT3	Q9NQE9	182 aa	Known RBP	5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	CHRAC1	Q9NRG0	131 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	YAE1D1	Q9NRH1	226 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	GPR173	Q9NS66	373 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	TREX1	Q9NSU2	369 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	FAM120C	Q9NX05	1096 aa	Known RBP	5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	BFAR	Q9NZS9	450 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	PAK5	Q9P286	719 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	CIDEB	Q9UHD4	219 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	MRPS33	Q9Y291	106 aa	Known RBP	5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	ZNF835	Q9Y2P0	537 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	GRIP1	Q9Y3R0	1128 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	DUSP10	Q9Y6W6	482 aa		5.17	□□□□□ -1.58
CASC19-233	ENST00000641487	PIKFYVE	Q9Y2I7	2098 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	KCNE1B	A0A087WTH5	132 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	IGKV1-8	A0A0C4DH67	115 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487		A0A0U1RRA0	63 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487		A0A1W2PN81	502 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	ARHGEF33	A8MVX0	844 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	HSBP1L1	C9JCN9	74 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487		M0QZ24	198 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	CLIC1	O00299	241 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	SLC16A5	O15375	505 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	ZNF208	O43345	1280 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	FOXS1	O43638	330 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	PRAF2	O60831	178 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	TRIM3	O75382	744 aa	Predicted RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	ZNF254	O75437	659 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	PSIP1	O75475	530 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	SPDEF	O95238	335 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	KRT14	P02533	472 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	APRT	P07741	180 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	CELA2A	P08217	269 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	ITGAM	P11215	1152 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	ENO3	P13929	434 aa	Predicted RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	FCGR2B	P31994	310 aa	Predicted RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	CHRNA7	P36544	502 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	GRIA1	P42261	906 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	NPY2R	P49146	381 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	MAPK12	P53778	367 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	CBX1	P83916	185 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	FASTK	Q14296	549 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	RBBP5	Q15291	538 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	EXT1	Q16394	746 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	C3AR1	Q16581	482 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	HKDC1	Q2TB90	917 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	KRTAP21-3	Q3LHN1	58 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	TTLL9	Q3SXZ7	439 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	CTSL3P	Q5NE16	218 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	ACER2	Q5QJU3	275 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	AGAP6	Q5VW22	663 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	CARD17	Q5XLA6	110 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	H3F3C	Q6NXT2	135 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	CD164L2	Q6UWJ8	174 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	SPNS3	Q6ZMD2	512 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	CPEB2	Q7Z5Q1	589 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	COMTD1	Q86VU5	262 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	ZC3HC1	Q86WB0	502 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	GCNT2	Q8N0V5	402 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	SLC43A2	Q8N370	569 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	RNF10	Q8N5U6	811 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	PARP16	Q8N5Y8	322 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	SLC5A8	Q8N695	610 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	FAM47B	Q8NA70	645 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	TMEM178A	Q8NBL3	297 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	OR4A16	Q8NH70	328 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	M1AP	Q8TC57	530 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	MZB1	Q8WU39	189 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	PHF10	Q8WUB8	498 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	SCMH1	Q96GD3	660 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	BIRC8	Q96P09	236 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	CYTH2	Q99418	400 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	UTP23	Q9BRU9	249 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	KIFC1	Q9BW19	673 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	MRPL13	Q9BYD1	178 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	VN1R1	Q9GZP7	353 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	PCBD2	Q9H0N5	130 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	GALNT9	Q9HCQ5	603 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	MMP25	Q9NPA2	562 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	LZTFL1	Q9NQ48	299 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	UBAP1	Q9NZ09	502 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	EHD3	Q9NZN3	535 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	TXNDC16	Q9P2K2	825 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	RHCG	Q9UBD6	479 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	TAC3	Q9UHF0	121 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	RUVBL2	Q9Y230	463 aa	Known RBP	5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	MEMO1	Q9Y316	297 aa		5.16	□□□□□ -1.58
CASC19-233	ENST00000641487	DCHS2	Q6V1P9	2916 aa		5.16	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms