RNA–Protein interactions for RNA: ENST00000637968.1

SCN1A-216, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,614 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-216ENST00000637968 SBK3P0C264 359 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 INSRRP14616 1297 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 GOT1P17174 413 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 CD34P28906 385 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 DGKEP52429 567 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SLC16A1P53985 500 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 NRG3P56975 720 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 LSM6P62312 80 aaKnown RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 H3F3AP84243 136 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 NHLH1Q02575 133 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SLC35G1Q2M3R5 365 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TMIGD1Q6UXZ0 262 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 LINGO4Q6UY18 593 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 NHLRC1Q6VVB1 395 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SLC30A8Q8IWU4 369 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 KDM8Q8N371 416 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 FAM98AQ8NCA5 519 aaKnown RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 OR51S1Q8NGJ8 323 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SMOQ99835 787 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ADGRE3Q9BY15 652 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SFXN1Q9H9B4 322 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 NMRK2Q9NPI5 230 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 MFNGO00587 321 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 CYR61O00622 381 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 DPYSL4O14531 572 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 CCSO14618 274 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 MATN3O15232 486 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 MFSD11O43934 449 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ZFPL1O95159 310 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 FGF19O95750 216 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ARG1P05089 322 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 CD46P15529 392 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TYRP1P17643 537 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 FOXA1P55317 472 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SEC13P55735 322 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ERVFC1-1P60608 527 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SEMG2Q02383 582 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 UBE2V2Q15819 145 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 MESTQ5EB52 335 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TCEAL5Q5H9L2 206 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ZNF626Q68DY1 528 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ARL9Q6T311 187 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 OR5M1Q8NGP8 315 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 OR1N1Q8NGS0 311 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TMED6Q8WW62 240 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 DCUN1D4Q92564 292 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 PEBP4Q96S96 227 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 OSMRQ99650 979 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 DOHHQ9BU89 302 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ST6GALNAC4Q9H4F1 302 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 RNF19AQ9NV58 838 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 CXXC1Q9P0U4 656 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 GABRQQ9UN88 632 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TMED3Q9Y3Q3 217 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 WDR45Q9Y484 360 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 MMP24Q9Y5R2 645 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 STYXL1Q9Y6J8 313 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ARL5CA6NH57 179 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 C2CD4BA6NLJ0 364 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 GABRR3A8MPY1 467 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 MAGEB17A8MXT2 336 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 BLOC1S5-TXNDC5H3BN57 136 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SEPT4O43236 478 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 B4GALT5O43286 388 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ARL6IP5O75915 188 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 OR2J2O76002 312 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SOX14O95416 240 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 C4BPAP04003 597 aaKnown RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 EIF4EP06730 217 aaKnown RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 CRHP06850 196 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 FAM157BP0CG42 384 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 IFNGR2P38484 337 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SULT1A1P50225 295 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 DVL1P1P54792 670 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 STXBP1P61764 594 aaKnown RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TMEM115Q12893 351 aaPredicted RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TEAD2Q15562 447 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 KHDC3LQ587J8 217 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 GLB1L2Q8IW92 636 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 NKAPQ8N5F7 415 aaKnown RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 KCNRGQ8N5I3 272 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 STEAP2Q8NFT2 490 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 OR1J2Q8NGS2 313 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SIGLEC11Q96RL6 698 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 PCYT2Q99447 389 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 CCDC3Q9BQI4 270 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 RNF208Q9H0X6 261 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 SMOC1Q9H4F8 434 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TUBA4BQ9H853 241 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 RDH14Q9HBH5 336 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TRIM36Q9NQ86 728 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 MIEF1Q9NQG6 463 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 GPATCH2Q9NW75 528 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 TAS2R8Q9NYW2 309 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ABRACLQ9P1F3 81 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 RCC2Q9P258 522 aaKnown RBP5.35□□□□□ -1.55
SCN1A-216ENST00000637968 FBXL3Q9UKT7 428 aa5.35□□□□□ -1.55
SCN1A-216ENST00000637968 ATAD5Q96QE3 1844 aa5.34□□□□□ -1.55
SCN1A-216ENST00000637968 A6NNC1 897 aa5.34□□□□□ -1.55
SCN1A-216ENST00000637968 IGHEP01854 428 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms