RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 SF3B4Q15427 424 aaKnown RBP eCLIP7□□□□□ -1.29
PNKP-229ENST00000637897 MAPK11Q15759 364 aa7□□□□□ -1.29
PNKP-229ENST00000637897 FAM98BQ52LJ0 330 aaKnown RBP7□□□□□ -1.29
PNKP-229ENST00000637897 DCST2Q5T1A1 773 aa7□□□□□ -1.29
PNKP-229ENST00000637897 INTS11Q5TA45 600 aaKnown RBP7□□□□□ -1.29
PNKP-229ENST00000637897 AP1ARQ63HQ0 302 aa7□□□□□ -1.29
PNKP-229ENST00000637897 ANKRD34AQ69YU3 496 aa7□□□□□ -1.29
PNKP-229ENST00000637897 HEPHL1Q6MZM0 1159 aa7□□□□□ -1.29
PNKP-229ENST00000637897 ERICH5Q6P6B1 374 aa7□□□□□ -1.29
PNKP-229ENST00000637897 DNAJC14Q6Y2X3 702 aaPredicted RBP7□□□□□ -1.29
PNKP-229ENST00000637897 NUFIP2Q7Z417 695 aaKnown RBP7□□□□□ -1.29
PNKP-229ENST00000637897 ATG4DQ86TL0 474 aaPredicted RBP7□□□□□ -1.29
PNKP-229ENST00000637897 SERPINA11Q86U17 422 aa7□□□□□ -1.29
PNKP-229ENST00000637897 ANKRD46Q86W74 232 aa7□□□□□ -1.29
PNKP-229ENST00000637897 TRIML2Q8N7C3 387 aa7□□□□□ -1.29
PNKP-229ENST00000637897 CNEP1R1Q8N9A8 125 aa7□□□□□ -1.29
PNKP-229ENST00000637897 CHDHQ8NE62 594 aaPredicted RBP7□□□□□ -1.29
PNKP-229ENST00000637897 OR10A6Q8NH74 314 aa7□□□□□ -1.29
PNKP-229ENST00000637897 GPR119Q8TDV5 335 aa7□□□□□ -1.29
PNKP-229ENST00000637897 ROBO4Q8WZ75 1007 aa7□□□□□ -1.29
PNKP-229ENST00000637897 OR7D2Q96RA2 312 aa7□□□□□ -1.29
PNKP-229ENST00000637897 SDF2Q99470 211 aa7□□□□□ -1.29
PNKP-229ENST00000637897 SMR3AQ99954 134 aa7□□□□□ -1.29
PNKP-229ENST00000637897 INPP5KQ9BT40 448 aa7□□□□□ -1.29
PNKP-229ENST00000637897 C9orf16Q9BUW7 83 aa7□□□□□ -1.29
PNKP-229ENST00000637897 TBL1XR1Q9BZK7 514 aa7□□□□□ -1.29
PNKP-229ENST00000637897 PIGMQ9H3S5 423 aa7□□□□□ -1.29
PNKP-229ENST00000637897 SLC24A3Q9HC58 644 aa7□□□□□ -1.29
PNKP-229ENST00000637897 NEUROD4Q9HD90 331 aa7□□□□□ -1.29
PNKP-229ENST00000637897 PLSCR4Q9NRQ2 329 aa7□□□□□ -1.29
PNKP-229ENST00000637897 UBQLN4Q9NRR5 601 aa7□□□□□ -1.29
PNKP-229ENST00000637897 PCDHGB4Q9UN71 923 aa7□□□□□ -1.29
PNKP-229ENST00000637897 ZNF175Q9Y473 711 aa7□□□□□ -1.29
PNKP-229ENST00000637897 DSCAMO60469 2012 aa7□□□□□ -1.29
PNKP-229ENST00000637897 TLN2Q9Y4G6 2542 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 CLDN24A6NM45 220 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 CXCR6O00574 342 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 EIF1AYO14602 144 aaKnown RBP6.99□□□□□ -1.29
PNKP-229ENST00000637897 SS18L1O75177 396 aaPredicted RBP6.99□□□□□ -1.29
PNKP-229ENST00000637897 DEAF1O75398 565 aaPredicted RBP6.99□□□□□ -1.29
PNKP-229ENST00000637897 UGT2B17O75795 530 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 SMNDC1O75940 238 aaKnown RBP eCLIP6.99□□□□□ -1.29
PNKP-229ENST00000637897 H6PDO95479 791 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 PLAUP00749 431 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 RAP2AP10114 183 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 ZNF26P17031 533 aaPredicted RBP6.99□□□□□ -1.29
PNKP-229ENST00000637897 PRKCAP17252 672 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 CRYGSP22914 178 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 NTF4P34130 210 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 PEX19P40855 299 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 CDKN2CP42773 168 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 EIF1AXP47813 144 aaKnown RBP6.99□□□□□ -1.29
PNKP-229ENST00000637897 GZMMP51124 257 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 RAC1P63000 192 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 CHRNB3Q05901 458 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 ZNHIT3Q15649 155 aaPredicted RBP6.99□□□□□ -1.29
PNKP-229ENST00000637897 ATP6AP1Q15904 470 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 DEFB113Q30KQ7 82 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 SLC25A53Q5H9E4 307 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 HMBOX1Q6NT76 420 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 PPP4R4Q6NUP7 873 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 STAC2Q6ZMT1 411 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 ZBTB49Q6ZSB9 765 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 ZNF621Q6ZSS3 439 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 FAM214BQ7L5A3 538 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 SZRD1Q7Z422 152 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 C6orf120Q7Z4R8 191 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 HMGN2P46Q86SG4 172 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 AMIGO2Q86SJ2 522 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 KIF18BQ86Y91 864 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 CIARTQ8N365 385 aaPredicted RBP6.99□□□□□ -1.29
PNKP-229ENST00000637897 MEIOBQ8N635 442 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 COX18Q8N8Q8 333 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 OR2V1Q8NHB1 315 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 GOT1L1Q8NHS2 421 aaPredicted RBP6.99□□□□□ -1.29
PNKP-229ENST00000637897 B4GALNT2Q8NHY0 566 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 ZFP28Q8NHY6 868 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 ABHD3Q8WU67 409 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 FAM162AQ96A26 154 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 POM121Q96HA1 1249 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 ALPK1Q96QP1 1244 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 BDH2Q9BUT1 245 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 ACTRT3Q9BYD9 372 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 RAD21L1Q9H4I0 556 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 IKZF5Q9H5V7 419 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 PIF1Q9H611 641 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 MAGIXQ9H6Y5 334 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 PTGES2Q9H7Z7 377 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 C3orf14Q9HBI5 128 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 SDHAF3Q9NRP4 125 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 SLC6A13Q9NSD5 602 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 SCOCQ9UIL1 159 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 CARD8Q9Y2G2 431 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 SNX8Q9Y5X2 465 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 ABCA2Q9BZC7 2435 aa6.99□□□□□ -1.29
PNKP-229ENST00000637897 NIPBLQ6KC79 2804 aaeCLIP6.98□□□□□ -1.29
PNKP-229ENST00000637897 A0A087WZY1 265 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 ZNF814B7Z6K7 855 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 LINC01387J3KSC0 135 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 GCM2O75603 506 aaPredicted RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms