RNA–Protein interactions for RNA: ENST00000637450.1

CLN6-220, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3

Gene CLN6, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-220ENST00000637450 MAGEA8P43361 318 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 OR2B6P58173 313 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 UFM1P61960 85 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 STX3Q13277 289 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 AGAP6Q5VW22 663 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 ANKFN1Q8N957 763 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 OR52N5Q8NH56 324 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 SLC38A1Q9H2H9 487 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 MTHFD2LQ9H903 347 aaPredicted RBP16.25■□□□□ 0.19
CLN6-220ENST00000637450 TAS2R16Q9NYV7 291 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 MALT1Q9UDY8 824 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 OSGIN1Q9UJX0 560 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 ABCA1O95477 2261 aa16.25■□□□□ 0.19
CLN6-220ENST00000637450 TMED7-TICAM2A0A0A6YYA0 188 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 TMEM72A0PK05 275 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 CCDC154A6NI56 674 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 E7EQL1 145 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 PDLIM1O00151 329 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 AP3D1O14617 1153 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 ZNF208O43345 1280 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 EIF1BO60739 113 aaKnown RBP16.24■□□□□ 0.19
CLN6-220ENST00000637450 CHRM4P08173 479 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 ALDOCP09972 364 aaKnown RBP16.24■□□□□ 0.19
CLN6-220ENST00000637450 PTNP21246 168 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 IL12AP29459 219 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 FOXG1P55316 489 aaPredicted RBP16.24■□□□□ 0.19
CLN6-220ENST00000637450 NME5P56597 212 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 TXNL4AP83876 142 aaKnown RBP16.24■□□□□ 0.19
CLN6-220ENST00000637450 GABRA6Q16445 453 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 TNFAIP8L3Q5GJ75 292 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 OR7E24Q6IFN5 339 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 KLHL17Q6TDP4 642 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 LRRC74BQ6ZQY2 392 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 PIAS4Q8N2W9 510 aaPredicted RBP16.24■□□□□ 0.19
CLN6-220ENST00000637450 TRIML2Q8N7C3 387 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 PMM1Q92871 262 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 DDIT4LQ96D03 193 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 DHRS9Q9BPW9 319 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 AIG1Q9NVV5 245 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 TMED7Q9Y3B3 224 aa16.24■□□□□ 0.19
CLN6-220ENST00000637450 ALPK2Q86TB3 2170 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 A0A1W2PR80 420 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 FAAHO00519 579 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 TP53P04637 393 aaPredicted RBP16.23■□□□□ 0.19
CLN6-220ENST00000637450 PGRP06401 933 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 ITGA5P08648 1049 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 IMPDH2P12268 514 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 RPS4Y1P22090 263 aaKnown RBP16.23■□□□□ 0.19
CLN6-220ENST00000637450 CD40P25942 277 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 TACR3P29371 465 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 TTKP33981 857 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 CDKN2CP42773 168 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 SLC1A3P43003 542 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 ZNF83P51522 516 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 POLR2HP52434 150 aaKnown RBP16.23■□□□□ 0.19
CLN6-220ENST00000637450 MAP2K6P52564 334 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 SLC35A1P78382 337 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 NRF1Q16656 503 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 C11orf71Q6IPW1 123 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 SLC22A25Q6T423 547 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 ZNF621Q6ZSS3 439 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 OR52E4Q8NGH9 312 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 PANX1Q96RD7 426 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 NAA11Q9BSU3 229 aaPredicted RBP16.23■□□□□ 0.19
CLN6-220ENST00000637450 INPP5KQ9BT40 448 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 KCNK9Q9NPC2 374 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 PARPBPQ9NWS1 579 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.23■□□□□ 0.19
CLN6-220ENST00000637450 FLVCR1Q9Y5Y0 555 aa16.23■□□□□ 0.19
CLN6-220ENST00000637450 V9GYY5 206 aaPredicted RBP16.23■□□□□ 0.19
CLN6-220ENST00000637450 SDHDO14521 159 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 TLX2O43763 284 aaPredicted RBP16.22■□□□□ 0.19
CLN6-220ENST00000637450 CD5LO43866 347 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 SSX4O60224 188 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 ANXA11P50995 505 aaKnown RBP16.22■□□□□ 0.19
CLN6-220ENST00000637450 IRX1P78414 480 aaPredicted RBP16.22■□□□□ 0.19
CLN6-220ENST00000637450 SPOCK1Q08629 439 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 LRRC74AQ0VAA2 488 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 BST1Q10588 318 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 SLC17A1Q14916 467 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 COX20Q5RI15 118 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 SPATA19Q7Z5L4 167 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 LSRQ86X29 649 aaPredicted RBP16.22■□□□□ 0.19
CLN6-220ENST00000637450 WDR31Q8NA23 367 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 ADAD1Q96M93 576 aaKnown RBP16.22■□□□□ 0.19
CLN6-220ENST00000637450 OR52E6Q96RD3 313 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 RHNO1Q9BSD3 238 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 CACNG6Q9BXT2 260 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 PARD6BQ9BYG5 372 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 AMBRA1Q9C0C7 1298 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 ADAM19Q9H013 955 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 CBLN4Q9NTU7 201 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 DCTN4Q9UJW0 460 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 SLC9A8Q9Y2E8 581 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 GPR45Q9Y5Y3 372 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 PLCE1Q9P212 2302 aa16.22■□□□□ 0.19
CLN6-220ENST00000637450 CUBNO60494 3623 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 CFAP73A6NFT4 308 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 GSNP06396 782 aa16.21■□□□□ 0.19
CLN6-220ENST00000637450 DBIP07108 87 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms