RNA–Protein interactions for RNA: ENST00000636792.1

UPF3B-205, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3B, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-205ENST00000636792 ARHGAP21Q5T5U3 1957 aa6.07□□□□□ -1.44
UPF3B-205ENST00000636792 SPTA1P02549 2419 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 SHANK1Q9Y566 2161 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 A0A1B0GWA3 101 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 OR2M5A3KFT3 312 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 PINLYPA6NC86 204 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ERICH4A6NGS2 130 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 B4DXG7 233 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 K7EM74 188 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ZIC3O60481 467 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 WDR1O75083 606 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 NPIPB7O75200 414 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 GADD45GO95257 159 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 PMS2P2O95744 297 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 MT-ATP6P00846 226 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 H1F0P07305 194 aaKnown RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 RFPL3SP0C7P2 107 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 FCGR2AP12318 317 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ZNF708P17019 499 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 CXCR1P25024 350 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 FASP25445 335 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 MST1P26927 711 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 HTR2AP28223 471 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TACR3P29371 465 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 IFNGR2P38484 337 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TDGF1P3P51864 188 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ARHGDIAP52565 204 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 HMGA2P52926 109 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 B3GALT5-AS1P59052 145 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 CSNK2A1P68400 391 aaPredicted RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 CRYZQ08257 329 aaKnown RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 CCNIQ14094 377 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 KPNB1Q14974 876 aaKnown RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TAF11Q15544 211 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 OR1Q1Q15612 314 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 SYT14P1Q58G82 188 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 FAM69AQ5T7M9 428 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 VASNQ6EMK4 673 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 OR2T5Q6IEZ7 315 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TTC33Q6PID6 262 aaPredicted RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 DEF8Q6ZN54 512 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 Q6ZPB1 254 aaPredicted RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TRILQ7L0X0 811 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 SVOPLQ8N434 492 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 AMER2Q8N7J2 671 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 FAM86B1Q8N7N1 296 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ST6GALNAC3Q8NDV1 305 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ADPRHL1Q8NDY3 354 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 OR2T29Q8NH02 315 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 VANGL1Q8TAA9 524 aaPredicted RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 LIPHQ8WWY8 451 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ACOT11Q8WXI4 607 aaPredicted RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 CPNE4Q96A23 557 aaPredicted RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ZHX1-C8orf76Q96EF9 292 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 SLC41A3Q96GZ6 507 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ZFP3Q96NJ6 502 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 GNRHR2Q96P88 292 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TAAR6Q96RI8 345 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TACO1Q9BSH4 297 aaKnown RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 FNDC11Q9BVV2 318 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 RSPO3Q9BXY4 272 aaPredicted RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 NDEL1Q9GZM8 345 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 DENND2DQ9H6A0 471 aaPredicted RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 LDAHQ9H6V9 325 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 REEP1Q9H902 201 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 GP6Q9HCN6 339 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TIGARQ9NQ88 270 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 DNAJB9Q9UBS3 223 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ENOPH1Q9UHY7 261 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 RIMS3Q9UJD0 308 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 OSGIN1Q9UJX0 560 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 SLC7A7Q9UM01 511 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 A4GNTQ9UNA3 340 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 AURKCQ9UQB9 309 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TRAPPC4Q9Y296 219 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 HIF3AQ9Y2N7 669 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 AP4S1Q9Y587 144 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 CORINQ9Y5Q5 1042 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 CELSR3Q9NYQ7 3312 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 PHF3Q92576 2039 aaKnown RBP6.06□□□□□ -1.44
UPF3B-205ENST00000636792 ZNF407Q9C0G0 2248 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 LOC400499M0QZD8 3231 aa6.06□□□□□ -1.44
UPF3B-205ENST00000636792 TLN1Q9Y490 2541 aaKnown RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 GTF3C1Q12789 2109 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 TMED7-TICAM2A0A0A6YYA0 188 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 NPIPB13A6NJU9 1138 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 CPSF4LA6NMK7 179 aaKnown RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 FAM166BA8MTA8 275 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 AHRRA9YTQ3 701 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 NPIPB4C9JG80 1138 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 G3V3Y1 287 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 H0YHG0 523 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 SEC14L5O43304 696 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 FRS3O43559 492 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 TPST2O60704 377 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 EIF1BO60739 113 aaKnown RBP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 ADAM11O75078 769 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 SMNDC1O75940 238 aaKnown RBP eCLIP6.05□□□□□ -1.44
UPF3B-205ENST00000636792 VAMP5O95183 116 aa6.05□□□□□ -1.44
UPF3B-205ENST00000636792 AHSA1O95433 338 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms