RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 ARHGAP22Q7Z5H3 698 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 KISS1RQ969F8 398 aaPredicted RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 ABHD17AQ96GS6 310 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 B3GNT4Q9C0J1 378 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 FKRPQ9H9S5 495 aa8.34□□□□□ -1.07
HDAC9-229ENST00000622668 PAIP2BQ9ULR5 123 aaKnown RBP8.34□□□□□ -1.07
HDAC9-229ENST00000622668 CEP350Q5VT06 3117 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 TNFSF11O14788 317 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 EFSO43281 561 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 RAD51DO75771 328 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 SEC14L2O76054 403 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 KDM4BO94953 1096 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 DMTNQ08495 405 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF385BQ569K4 471 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 FHL5Q5TD97 284 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 PLAG1Q6DJT9 500 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 PLBD1Q6P4A8 553 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 KLHL17Q6TDP4 642 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 MDGA2Q7Z553 956 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 CLVS1Q8IUQ0 354 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 OR52N5Q8NH56 324 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 ZFP90Q8TF47 636 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 NMNAT1Q9HAN9 279 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF226Q9NYT6 803 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 GPR52Q9Y2T5 361 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 MN1Q10571 1320 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 TRAV36DV7A0A075B6V5 113 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 H7C1C5 153 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 CELA2AP08217 269 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 PEX2P28328 305 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 APOBEC1P41238 236 aaKnown RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 RIDAP52758 137 aaKnown RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 LCN6P62502 163 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 TCF15Q12870 199 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 PRTGQ2VWP7 1150 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 SLC36A2Q495M3 483 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 FAM69AQ5T7M9 428 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 MAMSTRQ6ZN01 415 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 SERPINA11Q86U17 422 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 KLHL36Q8N4N3 616 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 ISL2Q96A47 359 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 FAM71F1Q96KD3 344 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 PRRC1Q96M27 445 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 COL4A6Q14031 1691 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 A0A096LPE4 126 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 A0A1W2PPZ6 126 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 TIMM8AO60220 97 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 OXSR1O95747 527 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 IST1P53990 364 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 TPTEP56180 551 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF57Q68EA5 555 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 C5orf46Q6UWT4 87 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 SLC35D2Q76EJ3 337 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 SLC46A3Q7Z3Q1 461 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 OR8H2Q8N162 312 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 PLPP5Q8NEB5 264 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 OR9Q2Q8NGE9 314 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 CRELD1Q96HD1 420 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF300Q96RE9 604 aaPredicted RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 ZNF337Q9Y3M9 751 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 ASB4Q9Y574 426 aa8.33□□□□□ -1.08
HDAC9-229ENST00000622668 FASNP49327 2511 aaKnown RBP8.33□□□□□ -1.08
HDAC9-229ENST00000622668 RALGAPA1Q6GYQ0 2036 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 LCTP09848 1927 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 A0A0A6YYD5 115 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 HTR3EA5X5Y0 456 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 MAGEA13PA6NCF6 341 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 H3BUI4 141 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 M0R1B8 84 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CDX4O14627 284 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 TIAF1O95411 115 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 MAGEA5P43359 124 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 C19orf57Q0VDD7 668 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 C3AR1Q16581 482 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 SYT14P1Q58G82 188 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 C6orf52Q5T4I8 152 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 FCRLAQ7L513 359 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 IQCF1Q8N6M8 205 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 FDCSPQ8NFU4 85 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 OR5L1Q8NGL2 311 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 M1APQ8TC57 530 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 DCUN1D5Q9BTE7 237 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 HES7Q9BYE0 225 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 MYO16Q9Y6X6 1858 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 A0A087WV62 115 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 NID1P14543 1247 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 GABRA1P14867 456 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 PYCR1P32322 319 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CDH15P55291 814 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 DSCR4P56555 118 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 FOXF1Q12946 379 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 MADCAM1Q13477 382 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 PDE7AQ13946 482 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 CRTC2Q53ET0 693 aaPredicted RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 KIRREL2Q6UWL6 708 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 DND1Q8IYX4 353 aaKnown RBP8.32□□□□□ -1.08
HDAC9-229ENST00000622668 OR2V1Q8NHB1 315 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 C1orf216Q8TAB5 229 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 NPRL2Q8WTW4 380 aa8.32□□□□□ -1.08
HDAC9-229ENST00000622668 ZMYND19Q96E35 227 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms