RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 OR2T33Q8NG76 320 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 SLC38A2Q96QD8 506 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 TMEM9BQ9NQ34 198 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 ASB6Q9NWX5 421 aa9.61□□□□□ -0.87
VPS11-208ENST00000621676 ZAR1LA6NP61 321 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 C12orf71A8MTZ7 269 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 B4DXG7 233 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 DCTN6O00399 190 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 MAGEB3O15480 346 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 MPZL1O95297 269 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 BCL10O95999 233 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 CD59P13987 128 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 DLSTP36957 453 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 GPR143P51810 404 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 TMED1Q13445 227 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 ZBED5Q49AG3 693 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 EIPR1Q53HC9 387 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 C22orf42Q6IC83 251 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 MTFR2Q6P444 385 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 CXXC5Q7LFL8 322 aaKnown RBP9.6□□□□□ -0.87
VPS11-208ENST00000621676 RDH10Q8IZV5 341 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 TMEM99Q8N816 258 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 NAXEQ8NCW5 288 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 SNRNP27Q8WVK2 155 aaKnown RBP9.6□□□□□ -0.87
VPS11-208ENST00000621676 HS6ST2Q96MM7 605 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 ZNF582Q96NG8 517 aaPredicted RBP9.6□□□□□ -0.87
VPS11-208ENST00000621676 TAPBPLQ9BX59 468 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 SYT4Q9H2B2 425 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 OSGIN1Q9UJX0 560 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 CAB39Q9Y376 341 aaPredicted RBP9.6□□□□□ -0.87
VPS11-208ENST00000621676 DOCK10Q96BY6 2186 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 A0A087WV62 115 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 A0A1W2PRG6 482 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 OR6A2O95222 327 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 CLPSP04118 112 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 PPICP45877 212 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 MTNR1AP48039 350 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 CEBPEQ15744 281 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 RAET1LQ5VY80 246 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 LEG1Q6P5S2 330 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 CORO6Q6QEF8 472 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 MBOAT2Q6ZWT7 520 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 P2RY8Q86VZ1 359 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 DEPDC4Q8N2C3 294 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 ZBTB44Q8NCP5 570 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 TAAR8Q969N4 342 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 C3orf49Q96BT1 292 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 ZHX1-C8orf76Q96EF9 292 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 OR5B2Q96R09 309 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 OR1F2PQ96R84 312 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 MYEF2Q9P2K5 600 aaKnown RBP9.6□□□□□ -0.87
VPS11-208ENST00000621676 SRPK3Q9UPE1 567 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 CENPEQ02224 2701 aa9.6□□□□□ -0.87
VPS11-208ENST00000621676 SELENOFO60613 162 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 LALBAP00709 142 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 TP53P04637 393 aaPredicted RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 HIST1H2ABP04908 130 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 TSPAN19P0C672 248 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 MYL12AP19105 171 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 EVI2BP34910 448 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 STAT5AP42229 794 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 PSMD7P51665 324 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 BMXP51813 675 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 INSM1Q01101 510 aaPredicted RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 FOXK2Q01167 660 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 C3AR1Q16581 482 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 TMEM176BQ3YBM2 270 aaPredicted RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 KCTD21Q4G0X4 260 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 HIST3H2AQ7L7L0 130 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 GNPDA2Q8TDQ7 276 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 HIST1H2ACQ93077 130 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 ADIPOR1Q96A54 375 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 SLC46A1Q96NT5 459 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 PCED1AQ9H1Q7 454 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 IKZF2Q9UKS7 526 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 HS3ST3B1Q9Y662 390 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 MN1Q10571 1320 aaPredicted RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 EPG5Q9HCE0 2579 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 A0A0G2JMM0 328 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 A0A1W2PPB8 328 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 A0A1W2PRS3 328 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 KIR3DP1A8MWS1 328 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 CCL3P10147 92 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 ITGAMP11215 1152 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 IFNGR2P38484 337 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 DUSP3P51452 185 aaPredicted RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 C1orf94Q6P1W5 598 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 LRRC69Q6ZNQ3 347 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 ESX1Q8N693 406 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 SLC37A3Q8NCC5 494 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 BRIX1Q8TDN6 353 aaKnown RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 DCLRE1CQ96SD1 692 aaKnown RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 ARHGDIGQ99819 225 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 POLDIP3Q9BY77 421 aaKnown RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 SEC61A2Q9H9S3 476 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 PPP4R1LQ9P1A2 415 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 FAM166BA8MTA8 275 aa9.59□□□□□ -0.87
VPS11-208ENST00000621676 PRR23D1E9PI22 279 aaPredicted RBP9.59□□□□□ -0.87
VPS11-208ENST00000621676 E9PI62 339 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms