RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 ELOA3Q8NG57 546 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 ITLN2Q8WWU7 325 aaPredicted RBP16.66■□□□□ 0.26
CIRBP-245ENST00000621399 SDCCAG3Q96C92 435 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 DNAJA3Q96EY1 480 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 SLC47A1Q96FL8 570 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 ARL5BQ96KC2 179 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 SRXN1Q9BYN0 137 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 COQ10BQ9H8M1 238 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 C12orf10Q9HB07 376 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 Q9UFV3 132 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 HDGFL3Q9Y3E1 203 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 SNX13Q9Y5W8 968 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 LRRK2Q5S007 2527 aa16.66■□□□□ 0.26
CIRBP-245ENST00000621399 A0A0B4J2E0 115 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 A0A1B0GX12 115 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 A8MVM7 634 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 SULT2B1O00204 365 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 ARPC2O15144 300 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 PDE5AO76074 875 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 RCBTB2O95199 551 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 FCGR2AP12318 317 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 CHRNB4P30926 498 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 CEACAM8P31997 349 aaPredicted RBP16.65■□□□□ 0.26
CIRBP-245ENST00000621399 DIO1P49895 249 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 RAC3P60763 192 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 CSNK2A1P68400 391 aaPredicted RBP16.65■□□□□ 0.26
CIRBP-245ENST00000621399 MYBPHQ13203 477 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 OR2A2Q6IF42 318 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 ZNF613Q6PF04 617 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 XKRXQ6PP77 449 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 DEF8Q6ZN54 512 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 ASB5Q8WWX0 329 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 CPNE4Q96A23 557 aaPredicted RBP16.65■□□□□ 0.26
CIRBP-245ENST00000621399 SLC7A6OSQ96CW6 309 aaPredicted RBP16.65■□□□□ 0.26
CIRBP-245ENST00000621399 HSH2DQ96JZ2 352 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 BTBD10Q9BSF8 475 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 THTPAQ9BU02 230 aa16.65■□□□□ 0.26
CIRBP-245ENST00000621399 DCAF13Q9NV06 445 aaKnown RBP16.65■□□□□ 0.26
CIRBP-245ENST00000621399 SAMD4AQ9UPU9 718 aaKnown RBP16.65■□□□□ 0.26
CIRBP-245ENST00000621399 ZC3H12DA2A288 527 aaKnown RBP16.64■□□□□ 0.25
CIRBP-245ENST00000621399 AQP8O94778 261 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 TMIGD3P0DMS9 266 aaPredicted RBP16.64■□□□□ 0.25
CIRBP-245ENST00000621399 AGAP20933 346 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 CDH12P55289 794 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 ZNF239Q16600 458 aaKnown RBP16.64■□□□□ 0.25
CIRBP-245ENST00000621399 IFI44LQ53G44 452 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 SWT1Q5T5J6 900 aaKnown RBP16.64■□□□□ 0.25
CIRBP-245ENST00000621399 NAXEQ8NCW5 288 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 ADAMTS16Q8TE57 1224 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 CA5BP1Q8WTZ4 195 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 GEMIN6Q8WXD5 167 aaKnown RBP16.64■□□□□ 0.25
CIRBP-245ENST00000621399 ROBO4Q8WZ75 1007 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 SLC38A4Q969I6 547 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 INTS12Q96CB8 462 aaKnown RBP16.64■□□□□ 0.25
CIRBP-245ENST00000621399 NSMCE2Q96MF7 247 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 ZFP3Q96NJ6 502 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 POTEKPQ9BYX7 375 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 MYO7BQ6PIF6 2116 aa16.64■□□□□ 0.25
CIRBP-245ENST00000621399 TRAPPC13A5PLN9 417 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 ATP5HO75947 161 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 PMS2P2O95744 297 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 IFNW1P05000 195 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 ENPP1P22413 925 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 CTSSP25774 331 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 IDUAP35475 653 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 RASSF2P50749 326 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 OR2B6P58173 313 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 TAS2R41P59536 307 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 GCNT2Q8N0V5 402 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 STK35Q8TDR2 534 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 ZHX1-C8orf76Q96EF9 292 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 CLPTM1LQ96KA5 538 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 RNF122Q9H9V4 155 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 TRAPPC4Q9Y296 219 aa16.63■□□□□ 0.25
CIRBP-245ENST00000621399 A0A087WUJ7 227 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 PRKD3O94806 890 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 PLGP00747 810 aaPredicted RBP16.62■□□□□ 0.25
CIRBP-245ENST00000621399 FOXF2Q12947 444 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 TRIM25Q14258 630 aaKnown RBP16.62■□□□□ 0.25
CIRBP-245ENST00000621399 C1orf140Q5VVS0 124 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 GTF2IRD2BQ6EKJ0 949 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 FCRLAQ7L513 359 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 GTF2IRD2Q86UP8 949 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 TSPYL5Q86VY4 417 aaPredicted RBP16.62■□□□□ 0.25
CIRBP-245ENST00000621399 LIX1LQ8IVB5 337 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 MCEMP1Q8IX19 187 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 LILRB4Q8NHJ6 448 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 SLC41A3Q96GZ6 507 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 POLR2J2Q9GZM3 115 aaKnown RBP16.62■□□□□ 0.25
CIRBP-245ENST00000621399 POLR2J3Q9H1A7 115 aaKnown RBP16.62■□□□□ 0.25
CIRBP-245ENST00000621399 ACTR3BQ9P1U1 418 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 SLC7A7Q9UM01 511 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 V9GYQ6 96 aa16.62■□□□□ 0.25
CIRBP-245ENST00000621399 IGHV3-15A0A0B4J1V0 119 aa16.61■□□□□ 0.25
CIRBP-245ENST00000621399 DVL2O14641 736 aa16.61■□□□□ 0.25
CIRBP-245ENST00000621399 CHP2O43745 196 aa16.61■□□□□ 0.25
CIRBP-245ENST00000621399 NPIPB7O75200 414 aa16.61■□□□□ 0.25
CIRBP-245ENST00000621399 DNAJC8O75937 253 aaPredicted RBP16.61■□□□□ 0.25
CIRBP-245ENST00000621399 OR5F1O95221 314 aa16.61■□□□□ 0.25
CIRBP-245ENST00000621399 AHSA1O95433 338 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms