RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RASD1Q9Y272 281 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 RGPD8O14715 1765 aaPredicted RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM233B4DJY2 109 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 GPR37L1O60883 481 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SNNO75324 88 aaPredicted RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 EPHA1P21709 976 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SELENOWP63302 87 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 RUNX2Q13950 521 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 NFATC4Q14934 902 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ADIRFQ15847 76 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ZFP90Q8TF47 636 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 NPRL2Q8WTW4 380 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 PCED1BQ96HM7 432 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SGCZQ96LD1 299 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SGIP1Q9BQI5 828 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SMG9Q9H0W8 520 aaKnown RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 MRPL15Q9P015 296 aaKnown RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 TMEM212A6NML5 194 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ATP1B3P54709 279 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 FXYD4P59646 89 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 NKPD1Q17RQ9 610 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 LRRC26Q2I0M4 334 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 MS4A13Q5J8X5 152 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 RNF111Q6ZNA4 994 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SLC38A6Q8IZM9 456 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CPXM2Q8N436 756 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CMTM2Q8TAZ6 248 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CD200R1Q8TD46 325 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SDSLQ96GA7 329 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 C12orf42Q96LP6 360 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CRLF2Q9HC73 371 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 KCNG2Q9UJ96 466 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 FAM155AB1AL88 458 aaPredicted RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 H7BY64 318 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 M0R143 59 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ACP2P11117 423 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 AADACP22760 399 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 IDUAP35475 653 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SLC11A1P49279 550 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 MTNR1BP49286 362 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ACSM3Q53FZ2 586 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SFRP5Q5T4F7 317 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 MDGA2Q7Z553 956 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 ASPGQ86U10 573 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CPNE8Q86YQ8 564 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 OR4N2Q8NGD1 307 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 OR4K5Q8NGD3 323 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CLSTN3Q9BQT9 956 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 NTPCRQ9BSD7 190 aaKnown RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SYNPO2LQ9H987 977 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 SIDT1Q9NXL6 827 aaKnown RBP6.73□□□□□ -1.33
COLCA1-205ENST00000620864 BABAM2Q9NXR7 383 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 PLEK2Q9NYT0 353 aa6.73□□□□□ -1.33
COLCA1-205ENST00000620864 CXorf49A8MYA2 514 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 TNFSF8P32971 234 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 GABRA3P34903 492 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 GJA5P36382 358 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 UBE2NP61088 152 aaKnown RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 WDR5P61964 334 aaKnown RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PMPCAQ10713 525 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 FBXO48Q5FWF7 155 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CTSL3PQ5NE16 218 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 FAM69BQ5VUD6 431 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PLBD1Q6P4A8 553 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PPP1R3BQ86XI6 285 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 NLGN4XQ8N0W4 816 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 BPIFB2Q8N4F0 458 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 C1orf127Q8N9H9 656 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 AMDHD1Q96NU7 426 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 C1orf198Q9H425 327 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PDZD7Q9H5P4 517 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 RHCGQ9UBD6 479 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF629Q9UEG4 869 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CAMK2AQ9UQM7 478 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 H7BYZ3 331 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 KLK10O43240 276 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CPOXP36551 454 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF133P52736 654 aaPredicted RBP6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PTTG1IPP53801 180 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 TEKQ02763 1124 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SRYQ05066 204 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CPZQ66K79 652 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 C5orf46Q6UWT4 87 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 FBXW12Q6X9E4 464 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 RHOUQ7L0Q8 258 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 OR51A7Q8NH64 312 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF596Q8TC21 504 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 INTS14Q96SY0 518 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 DMAC2Q9NW81 257 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CACNG4Q9UBN1 327 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 SLC35A3Q9Y2D2 325 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ZNF281Q9Y2X9 895 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 MYADML2A6NDP7 307 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ANKRD30BLA7E2S9 258 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 MPIG6BO95866 241 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 RAB28P51157 221 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 CLCNKAP51800 687 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 TAS2R38P59533 333 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 PLCXD2Q0VAA5 305 aa6.72□□□□□ -1.33
COLCA1-205ENST00000620864 ELOCQ15369 112 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms