RNA–Protein interactions for RNA: ENST00000620787.4

PDLIM3-212, Transcript of PDZ and LIM domain 3, humanhuman

TSL 4 BASIC

Gene PDLIM3, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-212ENST00000620787 ELMOD3Q96FG2 381 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 KLHL15Q96M94 604 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 LINC00052Q96N35 136 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 BAIAP2Q9UQB8 552 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 NAP1L6A6NFF2 107 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 C1QTNF3-AMACRE9PGA6 284 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 GABARAPH6UMI1 98 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 ITGA10O75578 1167 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 ECDO95905 644 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 GAB4Q2WGN9 574 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 TRMT12Q53H54 448 aaKnown RBP18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 HES5Q5TA89 166 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 PLPP4Q5VZY2 271 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 UNQ9370/PRO34162Q6UXP9 181 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 GLDNQ6ZMI3 551 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 IQCF2Q8IXL9 164 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 GAL3ST3Q96A11 431 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 TNFRSF13CQ96RJ3 184 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 PDCD1LG2Q9BQ51 273 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 SDHAF2Q9NX18 166 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 AKAP7Q9P0M2 348 aaPredicted RBP18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 ICAM5Q9UMF0 924 aa18.04■□□□□ 0.48
PDLIM3-212ENST00000620787 TICRRQ7Z2Z1 1910 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 MFSD2BA6NFX1 497 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 OTOL1A6NHN0 477 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 ACTA2P62736 377 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 ACTG2P63267 376 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 RPE65Q16518 533 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 SLC25A25Q6KCM7 469 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 APOOLQ6UXV4 268 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 GRASPQ7Z6J2 395 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 OR6V1Q8N148 313 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 OR4K14Q8NGD5 310 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 ORAI1Q96D31 301 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 LIN7BQ9HAP6 207 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 MCCC2Q9HCC0 563 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 TRBV2A0A0J9YWF9 115 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 GPR89AB7ZAQ6 455 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 PIN1P1O15428 100 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 KRT33AO76009 404 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 RGS11O94810 467 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 CD1AP06126 327 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 GIPP09681 153 aaPredicted RBP18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 GPR89BP0CG08 455 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 C4BPBP20851 252 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 DPP4P27487 766 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 CMPK1P30085 196 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 EXOSC6Q5RKV6 272 aaKnown RBP18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 RPL22L1Q6P5R6 122 aaKnown RBP18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 TMEM81Q6P7N7 255 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 SLC39A5Q6ZMH5 540 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 NOX4Q9NPH5 578 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 KLHL9Q9P2J3 617 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 FBXL3Q9UKT7 428 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 TBX21Q9UL17 535 aa18.03■□□□□ 0.48
PDLIM3-212ENST00000620787 IFNGP01579 166 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 OR2T7P0C7T2 308 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 CPN1P15169 458 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 EDNRAP25101 427 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 NAA10P41227 235 aaPredicted RBP18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 IRF4Q15306 451 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 FHL5Q5TD97 284 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 OLFML2AQ68BL7 652 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 ARHGAP11AQ6P4F7 1023 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 FAM198BQ6UWH4 519 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 CACUL1Q86Y37 369 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 OR2T27Q8NH04 317 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 MOSPD2Q8NHP6 518 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 GRHL3Q8TE85 626 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 TIMM29Q9BSF4 260 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 NOX3Q9HBY0 568 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 PRSS16Q9NQE7 514 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 KLK11Q9UBX7 282 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 ING1Q9UK53 422 aaPredicted RBP18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 CA5BQ9Y2D0 317 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 INSL6Q9Y581 213 aa18.02■□□□□ 0.48
PDLIM3-212ENST00000620787 OR2M5A3KFT3 312 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 L7N2F9 121 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 PCDH8O95206 1070 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 SRMP19623 302 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 DRD3P35462 400 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 AP3S2P59780 193 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 SLC35F2Q8IXU6 374 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 SDR9C7Q8NEX9 313 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 OR52E2Q8NGJ4 325 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 OR51L1Q8NGJ5 315 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 HMGB4Q8WW32 186 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 WDR89Q96FK6 387 aaPredicted RBP18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 CNN2Q99439 309 aaKnown RBP18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 SLC25A18Q9H1K4 315 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 ADAP2Q9NPF8 381 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 POT1Q9NUX5 634 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 DEC1Q9P2X7 70 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 SERTAD3Q9UJW9 196 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 GNG8Q9UK08 70 aa18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 C19orf53Q9UNZ5 99 aaPredicted RBP18.02■□□□□ 0.47
PDLIM3-212ENST00000620787 TP53BP1Q12888 1972 aaPredicted RBP18.01■□□□□ 0.47
PDLIM3-212ENST00000620787 ANKRD20A5PA0PJZ0 165 aa18.01■□□□□ 0.47
PDLIM3-212ENST00000620787 OR6C65A6NJZ3 312 aa18.01■□□□□ 0.47
PDLIM3-212ENST00000620787 IFITM5A6NNB3 132 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms