RNA–Protein interactions for RNA: ENST00000620514.1

HMGN3-203, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 3 BASIC

Gene HMGN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-203ENST00000620514 ARHGEF9O43307 516 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 ZNF208O43345 1280 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 HOXB9P17482 250 aaPredicted RBP15.17■□□□□ 0.02
HMGN3-203ENST00000620514 FKBP2P26885 142 aaKnown RBP15.17■□□□□ 0.02
HMGN3-203ENST00000620514 ACAA2P42765 397 aaKnown RBP15.17■□□□□ 0.02
HMGN3-203ENST00000620514 CRISP3P54108 245 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 STK11Q15831 433 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 LIN52Q52LA3 116 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 NCMAPQ5T1S8 102 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 FUNDC1Q8IVP5 155 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 LILRB1Q8NHL6 650 aaPredicted RBP15.17■□□□□ 0.02
HMGN3-203ENST00000620514 PIGXQ8TBF5 258 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 AKAP1Q92667 903 aaKnown RBP eCLIP15.17■□□□□ 0.02
HMGN3-203ENST00000620514 NEUROG1Q92886 237 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 POTEKPQ9BYX7 375 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 ADAM19Q9H013 955 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 CALML5Q9NZT1 146 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 EMC3Q9P0I2 261 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 TRAPPC4Q9Y296 219 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 ZNF443Q9Y2A4 671 aaPredicted RBP15.17■□□□□ 0.02
HMGN3-203ENST00000620514 NOSIPQ9Y314 301 aaKnown RBP15.17■□□□□ 0.02
HMGN3-203ENST00000620514 CHST2Q9Y4C5 530 aa15.17■□□□□ 0.02
HMGN3-203ENST00000620514 DPRXA6NFQ7 191 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 POLR3GO15318 223 aaPredicted RBP15.16■□□□□ 0.02
HMGN3-203ENST00000620514 CLOCKO15516 846 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 DNPH1O43598 174 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 PRG2P13727 222 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 COX5AP20674 150 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 MRPL19P49406 292 aaKnown RBP15.16■□□□□ 0.02
HMGN3-203ENST00000620514 SLC16A1P53985 500 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 STX1BP61266 288 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 H3F3AP84243 136 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 RGNQ15493 299 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 YTHDF3Q7Z739 585 aaKnown RBP15.16■□□□□ 0.02
HMGN3-203ENST00000620514 ZNF440Q8IYI8 595 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 CADM2Q8N3J6 435 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 ZNF611Q8N823 705 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 MAL2Q969L2 176 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 DDIT4LQ96D03 193 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 C18orf12Q96KH6 178 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 Q96MF0 132 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 RNF115Q9Y4L5 304 aa15.16■□□□□ 0.02
HMGN3-203ENST00000620514 A0A096LPI6 279 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 CLIC1O00299 241 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 TGDSO95455 350 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 CD3EP07766 207 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 UQCRBP14927 111 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 ADSLP30566 484 aaPredicted RBP15.15■□□□□ 0.02
HMGN3-203ENST00000620514 PTH2RP49190 550 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 AQP5P55064 265 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 FOXG1P55316 489 aaPredicted RBP15.15■□□□□ 0.02
HMGN3-203ENST00000620514 SLC35A1P78382 337 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 BNIP2Q12982 314 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 FBXW9Q5XUX1 488 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 MSRB3Q8IXL7 192 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 UBE2J2Q8N2K1 259 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 CIARTQ8N365 385 aaPredicted RBP15.15■□□□□ 0.02
HMGN3-203ENST00000620514 ZNF433Q8N7K0 673 aaPredicted RBP15.15■□□□□ 0.02
HMGN3-203ENST00000620514 TMEM171Q8WVE6 324 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 APH1AQ96BI3 265 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 CCDC28BQ9BUN5 200 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 GSX2Q9BZM3 304 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 SLC25A37Q9NYZ2 338 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 SLAMF8Q9P0V8 285 aa15.15■□□□□ 0.02
HMGN3-203ENST00000620514 A0A0G2JPF8 293 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 HNRNPCL2B2RXH8 293 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 HNRNPCL3B7ZW38 293 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 NR5A2O00482 541 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 GPR171O14626 319 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 HNRNPCL1O60812 293 aaKnown RBP15.14■□□□□ 0.01
HMGN3-203ENST00000620514 MRPL33O75394 65 aaKnown RBP15.14■□□□□ 0.01
HMGN3-203ENST00000620514 RAD51DO75771 328 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 CNOT4O95628 575 aaKnown RBP15.14■□□□□ 0.01
HMGN3-203ENST00000620514 THBS1P07996 1170 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 INHBBP09529 407 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 HNRNPCL4P0DMR1 293 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 GGT1P19440 569 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 CXCR1P25024 350 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 BSPH1Q075Z2 132 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 LARS2Q15031 903 aaKnown RBP15.14■□□□□ 0.01
HMGN3-203ENST00000620514 PPA1Q15181 289 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 PAGE3Q5JUK9 113 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 RNF220Q5VTB9 566 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 ADAM5Q6NVV9 412 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 BLOC1S3Q6QNY0 202 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 Q71RC1 249 aaPredicted RBP15.14■□□□□ 0.01
HMGN3-203ENST00000620514 SERPINA11Q86U17 422 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 BIVMQ86UB2 503 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 C10orf111Q8N326 155 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 KBTBD8Q8NFY9 601 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 DYDC1Q8WWB3 177 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 USB1Q9BQ65 265 aaKnown RBP15.14■□□□□ 0.01
HMGN3-203ENST00000620514 SPATA9Q9BWV2 254 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 RSPO3Q9BXY4 272 aaPredicted RBP15.14■□□□□ 0.01
HMGN3-203ENST00000620514 ESRP2Q9H6T0 727 aaKnown RBP15.14■□□□□ 0.01
HMGN3-203ENST00000620514 A4GALTQ9NPC4 353 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 NGBQ9NPG2 151 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 SLC52A3Q9NQ40 469 aa15.14■□□□□ 0.01
HMGN3-203ENST00000620514 THUMPD1Q9NXG2 353 aaKnown RBP15.14■□□□□ 0.01
HMGN3-203ENST00000620514 CCDC167Q9P0B6 97 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms